RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
CDK4-207ENST00000550419 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 PGPA6NDG6 321 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 DIRC3C9JPN6 131 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
CDK4-207ENST00000550419 HBE1P02100 147 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 CRISP2P16562 243 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 DPPA3Q6W0C5 159 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 CMTM2Q8TAZ6 248 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 TMED6Q8WW62 240 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 TMEM208Q9BTX3 173 aa12.59□□□□□ -0.39
CDK4-207ENST00000550419 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 ZNF138P52744 262 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 ERCC8Q13216 396 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 RRN3P1Q2M238 152 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 EIF5AL1Q6IS14 154 aaKnown RBP12.58□□□□□ -0.4
CDK4-207ENST00000550419 C11orf45Q8TAV5 145 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 VGLL1Q99990 258 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 ZNF492Q9P255 531 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 LENEPQ9Y5L5 61 aa12.58□□□□□ -0.4
CDK4-207ENST00000550419 SERTM2A0A1B0GWG4 89 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 KLLNB2CW77 178 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 H7BYZ3 331 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 DEFB4AO15263 64 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 ZFP69Q49AA0 526 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 GFI1BQ5VTD9 330 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 C5orf17Q8NAS9 161 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
CDK4-207ENST00000550419 MAP1LC3B2A6NCE7 125 aa12.56□□□□□ -0.4
CDK4-207ENST00000550419 TAS2R60P59551 318 aa12.56□□□□□ -0.4
CDK4-207ENST00000550419 CD300CQ08708 224 aa12.56□□□□□ -0.4
CDK4-207ENST00000550419 SLC51BQ86UW2 128 aa12.56□□□□□ -0.4
CDK4-207ENST00000550419 C9orf62Q8N4C0 152 aa12.56□□□□□ -0.4
CDK4-207ENST00000550419 MBD3L1Q8WWY6 194 aa12.56□□□□□ -0.4
CDK4-207ENST00000550419 NKX6-2Q9C056 277 aaPredicted RBP12.56□□□□□ -0.4
CDK4-207ENST00000550419 MAP1LC3BQ9GZQ8 125 aa12.56□□□□□ -0.4
CDK4-207ENST00000550419 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
CDK4-207ENST00000550419 LOC102723971A0A1B0GUV8 181 aa12.55□□□□□ -0.4
CDK4-207ENST00000550419 FHITP49789 147 aa12.55□□□□□ -0.4
CDK4-207ENST00000550419 RAB5CP51148 216 aa12.55□□□□□ -0.4
CDK4-207ENST00000550419 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
CDK4-207ENST00000550419 LINC01587Q99440 93 aa12.55□□□□□ -0.4
CDK4-207ENST00000550419 GGTLC3B5MD39 225 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
CDK4-207ENST00000550419 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 IQCF2Q8IXL9 164 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 TMPRSS5Q9H3S3 457 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 ARL2-SNX15V9GYD0 113 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 CSMD3Q7Z407 3707 aa12.54□□□□□ -0.4
CDK4-207ENST00000550419 C7orf71A4D174 169 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 NUPR2A6NF83 97 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 TCRAP04437 139 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 GPX1P07203 203 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 FGF8P55075 233 aaPredicted RBP12.53□□□□□ -0.4
CDK4-207ENST00000550419 ZNF493Q6ZR52 646 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 GOLT1AQ6ZVE7 132 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 PYGO2Q9BRQ0 406 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 LINC00467Q9BRT7 94 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 NIPSNAP3BQ9BS92 247 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 EPDR1Q9UM22 224 aa12.53□□□□□ -0.4
CDK4-207ENST00000550419 TRAV12-3A0A0B4J271 114 aa12.52□□□□□ -0.41
CDK4-207ENST00000550419 FBLL1A6NHQ2 334 aaKnown RBP12.52□□□□□ -0.41
CDK4-207ENST00000550419 ZNF705GA8MUZ8 300 aaPredicted RBP12.52□□□□□ -0.41
CDK4-207ENST00000550419 K7EQM0 130 aa12.52□□□□□ -0.41
CDK4-207ENST00000550419 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.41
CDK4-207ENST00000550419 SPART-AS1P0CW21 52 aa12.52□□□□□ -0.41
CDK4-207ENST00000550419 NANOS2P60321 138 aaKnown RBP12.52□□□□□ -0.41
CDK4-207ENST00000550419 SFT2D1Q8WV19 159 aa12.52□□□□□ -0.41
CDK4-207ENST00000550419 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
CDK4-207ENST00000550419 FAM74A7A6NL05 159 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 H2AFB1P0C5Y9 115 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 CEMP1Q6PRD7 247 aaPredicted RBP12.51□□□□□ -0.41
CDK4-207ENST00000550419 Q8TAT8 98 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
CDK4-207ENST00000550419 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 ATG101Q9BSB4 218 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 DKK2Q9UBU2 259 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
CDK4-207ENST00000550419 TRAV1-1A0A0B4J248 108 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 C11orf94C9JXX5 98 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 J3KRW8 73 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 RNASE4P34096 147 aaKnown RBP12.5□□□□□ -0.41
CDK4-207ENST00000550419 SULT1A2P50226 295 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 GNG5P63218 68 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 PMS2P11Q13670 270 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
CDK4-207ENST00000550419 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
CDK4-207ENST00000550419 RPH3ALQ9UNE2 315 aa12.5□□□□□ -0.41
CDK4-207ENST00000550419 LYRM9A8MSI8 78 aa12.49□□□□□ -0.41
CDK4-207ENST00000550419 AZU1P20160 251 aa12.49□□□□□ -0.41
CDK4-207ENST00000550419 PPT1P50897 306 aa12.49□□□□□ -0.41
CDK4-207ENST00000550419 EMP1P54849 157 aa12.49□□□□□ -0.41
CDK4-207ENST00000550419 BTN1A1Q13410 526 aa12.49□□□□□ -0.41
CDK4-207ENST00000550419 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms