RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ANXA2RQ3ZCQ2 193 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 TMEM78Q5T7P6 136 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 FAM19A4Q96LR4 140 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 WDR61Q9GZS3 305 aaKnown RBP7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 OR51M1Q9H341 326 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 TRAV26-1A0A087WT03 109 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 GAGE12BA1L429 117 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 M0R3E3 92 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 GAGE7O76087 117 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 PYYP10082 97 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 PRB4P10163 310 aaPredicted RBP7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 BTF3P20290 206 aaKnown RBP7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 ICAM4Q14773 271 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 LRRC37A5PQ49AS3 106 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 TTC32Q5I0X7 151 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 SSX7Q7RTT5 188 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 LYPD1Q8N2G4 141 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 C6orf223Q8N319 242 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 EIF4E3Q8N5X7 224 aaKnown RBP7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 THAP6Q8TBB0 222 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 BLNKQ8WV28 456 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 PAXXQ9BUH6 204 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 SLC25A2Q9BXI2 301 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 PARD6GQ9BYG4 376 aaPredicted RBP7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 FUT9Q9Y231 359 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 LINC00588Q9Y4M8 146 aa7.6□□□□□ -1.19
VTI1BP3-201ENST00000550220 TRGV2A0A075B6R0 118 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 ZNF324O75467 553 aaPredicted RBP7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 SIX6O95475 246 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 IFNA5P01569 189 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 RNASE4P34096 147 aaKnown RBP7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 TAS2R45P59539 299 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 ERCC8Q13216 396 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 SLAQ13239 276 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 IBA57Q5T440 356 aaKnown RBP7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 EXOC3-AS1Q8N2X6 119 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 SCGB1C1Q8TD33 95 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 PPP1R1CQ8WVI7 109 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 FAM167A-AS1Q96KT0 104 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 ATP5SQ99766 215 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 Q9H8V8 135 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 PTTG2Q9NZH5 202 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 HERC2O95714 4834 aa7.59□□□□□ -1.19
VTI1BP3-201ENST00000550220 A0A1W2PPQ1 181 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 RBAKDNA6NC62 111 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 A6NHS1 94 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 RGS13O14921 159 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 SSNA1O43805 119 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 ZNF138P52744 262 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 GCSAMLQ5JQS6 135 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 FAM122CQ6P4D5 195 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 MIR17HGQ75NE6 70 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 UPK3BQ9BT76 320 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 GSN-AS1Q9NRJ2 163 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 OR5AC2Q9NZP5 309 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 FAT2Q9NYQ8 4349 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 DNAH17Q9UFH2 4485 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 DNAH2Q9P225 4427 aa7.58□□□□□ -1.2
VTI1BP3-201ENST00000550220 TRGV1A0A0A0MS02 117 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 A0A0J9YY99 117 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 H0YIZ8 118 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 OR7C2O60412 319 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 MPC2O95563 127 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 HOXA5P20719 270 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 TCL1AP56279 114 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 CD300CQ08708 224 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 KHDC3LQ587J8 217 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 FAM74A1Q5RGS3 127 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 Q6ZTI0 123 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 C11orf72Q8NBR9 251 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 FXYD5Q96DB9 178 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 ARPC5LQ9BPX5 153 aa7.57□□□□□ -1.2
VTI1BP3-201ENST00000550220 IGHV1OR15-1A0A075B7D0 117 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 SPINK4O60575 86 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 OR10J4P0C629 311 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 RPL12P30050 165 aaKnown RBP7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 H2BFSP57053 126 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 RANP62826 216 aaKnown RBP7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 IFITM3Q01628 133 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 BTN1A1Q13410 526 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 ZFAND2AQ8N6M9 145 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 VGLL1Q99990 258 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 TMPRSS5Q9H3S3 457 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 HSPB11Q9Y547 144 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 LENEPQ9Y5L5 61 aa7.56□□□□□ -1.2
VTI1BP3-201ENST00000550220 IGKV2-40A0A087WW87 121 aaPredicted RBP7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 IGKV2D-40P01614 121 aaPredicted RBP7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 UBE2L3P68036 154 aaKnown RBP7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 ZNF266Q14584 549 aa7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 ESRGQ1W209 222 aa7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 FFAR4Q5NUL3 377 aa7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 ARL6IP6Q8N6S5 226 aa7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 TMED6Q8WW62 240 aa7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 ST6GAL2Q96JF0 529 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms