RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 LINC00052Q96N35 136 aa3.67□□□□□ -1.82
APP-217ENST00000548570 GPR61Q9BZJ8 451 aa3.67□□□□□ -1.82
APP-217ENST00000548570 Q9H3A6 140 aa3.67□□□□□ -1.82
APP-217ENST00000548570 IGKV2-40A0A087WW87 121 aaPredicted RBP3.66□□□□□ -1.82
APP-217ENST00000548570 TRAV8-1A0A0A6YYK1 113 aa3.66□□□□□ -1.82
APP-217ENST00000548570 LOC102723971A0A1B0GUV8 181 aa3.66□□□□□ -1.82
APP-217ENST00000548570 A0A1W2PRE2 83 aa3.66□□□□□ -1.82
APP-217ENST00000548570 PGPA6NDG6 321 aa3.66□□□□□ -1.82
APP-217ENST00000548570 ZNF705EA8MWA4 302 aaPredicted RBP3.66□□□□□ -1.82
APP-217ENST00000548570 CRXO43186 299 aaPredicted RBP3.66□□□□□ -1.82
APP-217ENST00000548570 PAGE4O60829 102 aa3.66□□□□□ -1.82
APP-217ENST00000548570 IGKV2D-40P01614 121 aaPredicted RBP3.66□□□□□ -1.82
APP-217ENST00000548570 FRMD6-AS1P0C7T7 363 aa3.66□□□□□ -1.82
APP-217ENST00000548570 RBMY1A1P0DJD3 496 aaKnown RBP3.66□□□□□ -1.82
APP-217ENST00000548570 RBMY1CP0DJD4 496 aa3.66□□□□□ -1.82
APP-217ENST00000548570 CT45A10P0DMU9 189 aa3.66□□□□□ -1.82
APP-217ENST00000548570 HLA-DRB4P13762 266 aa3.66□□□□□ -1.82
APP-217ENST00000548570 C4BPBP20851 252 aa3.66□□□□□ -1.82
APP-217ENST00000548570 MEOX2P50222 304 aa3.66□□□□□ -1.82
APP-217ENST00000548570 CNN1P51911 297 aaKnown RBP3.66□□□□□ -1.82
APP-217ENST00000548570 TAS2R45P59539 299 aa3.66□□□□□ -1.82
APP-217ENST00000548570 UBE2G2P60604 165 aa3.66□□□□□ -1.82
APP-217ENST00000548570 RBMY1FQ15415 496 aaKnown RBP3.66□□□□□ -1.82
APP-217ENST00000548570 PRR9Q5T870 116 aa3.66□□□□□ -1.82
APP-217ENST00000548570 EIF5AL1Q6IS14 154 aaKnown RBP3.66□□□□□ -1.82
APP-217ENST00000548570 FOXI2Q6ZQN5 318 aa3.66□□□□□ -1.82
APP-217ENST00000548570 Q6ZQT7 251 aa3.66□□□□□ -1.82
APP-217ENST00000548570 OR8A1Q8NGG7 326 aa3.66□□□□□ -1.82
APP-217ENST00000548570 RPUSD4Q96CM3 377 aaKnown RBP3.66□□□□□ -1.82
APP-217ENST00000548570 RARRES2Q99969 163 aa3.66□□□□□ -1.82
APP-217ENST00000548570 VGLL1Q99990 258 aa3.66□□□□□ -1.82
APP-217ENST00000548570 SLC50A1Q9BRV3 221 aa3.66□□□□□ -1.82
APP-217ENST00000548570 AGPAT4-IT1Q9H0P7 198 aa3.66□□□□□ -1.82
APP-217ENST00000548570 SAV1Q9H4B6 383 aaPredicted RBP3.66□□□□□ -1.82
APP-217ENST00000548570 HLA-DRB4X5D2U9 266 aa3.66□□□□□ -1.82
APP-217ENST00000548570 NOTCH3Q9UM47 2321 aa3.66□□□□□ -1.82
APP-217ENST00000548570 DIRC3C9JPN6 131 aa3.65□□□□□ -1.83
APP-217ENST00000548570 TCRAP04437 139 aa3.65□□□□□ -1.83
APP-217ENST00000548570 S100A9P06702 114 aaKnown RBP3.65□□□□□ -1.83
APP-217ENST00000548570 RPL35AP18077 110 aaKnown RBP3.65□□□□□ -1.83
APP-217ENST00000548570 S100A7P31151 101 aa3.65□□□□□ -1.83
APP-217ENST00000548570 ID1P41134 155 aa3.65□□□□□ -1.83
APP-217ENST00000548570 PAFAH1B2P68402 229 aa3.65□□□□□ -1.83
APP-217ENST00000548570 PSG9Q00887 426 aa3.65□□□□□ -1.83
APP-217ENST00000548570 DEFA6Q01524 100 aa3.65□□□□□ -1.83
APP-217ENST00000548570 ACTL10Q5JWF8 245 aa3.65□□□□□ -1.83
APP-217ENST00000548570 S100A7AQ86SG5 101 aa3.65□□□□□ -1.83
APP-217ENST00000548570 ZNF575Q86XF7 245 aa3.65□□□□□ -1.83
APP-217ENST00000548570 SBSPONQ8IVN8 264 aa3.65□□□□□ -1.83
APP-217ENST00000548570 LYPD1Q8N2G4 141 aa3.65□□□□□ -1.83
APP-217ENST00000548570 CSNK1G2-AS1Q8NCQ2 148 aa3.65□□□□□ -1.83
APP-217ENST00000548570 ZNF738Q8NE65 137 aa3.65□□□□□ -1.83
APP-217ENST00000548570 Q8TAT8 98 aa3.65□□□□□ -1.83
APP-217ENST00000548570 C2CD4CQ8TF44 421 aa3.65□□□□□ -1.83
APP-217ENST00000548570 MRPL53Q96EL3 112 aaKnown RBP3.65□□□□□ -1.83
APP-217ENST00000548570 SGK494Q96LW2 274 aa3.65□□□□□ -1.83
APP-217ENST00000548570 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
APP-217ENST00000548570 SLC35B3Q9H1N7 401 aa3.65□□□□□ -1.83
APP-217ENST00000548570 SRD5A3Q9H8P0 318 aa3.65□□□□□ -1.83
APP-217ENST00000548570 OTORQ9NRC9 128 aa3.65□□□□□ -1.83
APP-217ENST00000548570 TMEM167BQ9NRX6 74 aa3.65□□□□□ -1.83
APP-217ENST00000548570 GNG13Q9P2W3 67 aa3.65□□□□□ -1.83
APP-217ENST00000548570 RNF24Q9Y225 148 aa3.65□□□□□ -1.83
APP-217ENST00000548570 CHTOPQ9Y3Y2 248 aaKnown RBP3.65□□□□□ -1.83
APP-217ENST00000548570 X6R8D5 127 aa3.65□□□□□ -1.83
APP-217ENST00000548570 NOTCH1P46531 2555 aa3.64□□□□□ -1.83
APP-217ENST00000548570 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
APP-217ENST00000548570 IFNA7P01567 189 aa3.64□□□□□ -1.83
APP-217ENST00000548570 IGKV3-20P01619 116 aa3.64□□□□□ -1.83
APP-217ENST00000548570 PRM2P04554 102 aa3.64□□□□□ -1.83
APP-217ENST00000548570 BCL2P10415 239 aa3.64□□□□□ -1.83
APP-217ENST00000548570 FXYD7P58549 80 aa3.64□□□□□ -1.83
APP-217ENST00000548570 SNRPD3P62318 126 aaKnown RBP3.64□□□□□ -1.83
APP-217ENST00000548570 BLOC1S1P78537 153 aa3.64□□□□□ -1.83
APP-217ENST00000548570 HIST1H1AQ02539 215 aaPredicted RBP3.64□□□□□ -1.83
APP-217ENST00000548570 HAGHQ16775 308 aa3.64□□□□□ -1.83
APP-217ENST00000548570 ZNF506Q5JVG8 444 aa3.64□□□□□ -1.83
APP-217ENST00000548570 CLLU1Q5K131 121 aa3.64□□□□□ -1.83
APP-217ENST00000548570 C9orf47Q6ZRZ4 202 aa3.64□□□□□ -1.83
APP-217ENST00000548570 GOLT1AQ6ZVE7 132 aa3.64□□□□□ -1.83
APP-217ENST00000548570 ZNF767PQ75MW2 155 aa3.64□□□□□ -1.83
APP-217ENST00000548570 GTSCR1Q86UQ5 136 aa3.64□□□□□ -1.83
APP-217ENST00000548570 C1orf158Q8N1D5 194 aa3.64□□□□□ -1.83
APP-217ENST00000548570 ZFAND2AQ8N6M9 145 aa3.64□□□□□ -1.83
APP-217ENST00000548570 C5orf17Q8NAS9 161 aa3.64□□□□□ -1.83
APP-217ENST00000548570 C11orf52Q96A22 123 aa3.64□□□□□ -1.83
APP-217ENST00000548570 DERL1Q9BUN8 251 aa3.64□□□□□ -1.83
APP-217ENST00000548570 RETNQ9HD89 108 aa3.64□□□□□ -1.83
APP-217ENST00000548570 ZNF492Q9P255 531 aa3.64□□□□□ -1.83
APP-217ENST00000548570 EPDR1Q9UM22 224 aa3.64□□□□□ -1.83
APP-217ENST00000548570 PRELID1Q9Y255 219 aa3.64□□□□□ -1.83
APP-217ENST00000548570 KLF12Q9Y4X4 402 aa3.64□□□□□ -1.83
APP-217ENST00000548570 ARL2-SNX15V9GYD0 113 aa3.64□□□□□ -1.83
APP-217ENST00000548570 TRAV12-2A0A075B6T6 113 aa3.63□□□□□ -1.83
APP-217ENST00000548570 A0A087WWL8 130 aa3.63□□□□□ -1.83
APP-217ENST00000548570 RBFOX3A6NFN3 312 aa3.63□□□□□ -1.83
APP-217ENST00000548570 KLLNB2CW77 178 aa3.63□□□□□ -1.83
APP-217ENST00000548570 C11orf94C9JXX5 98 aa3.63□□□□□ -1.83
APP-217ENST00000548570 M0R2Z0 102 aa3.63□□□□□ -1.83
APP-217ENST00000548570 PEX7O00628 323 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms