RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TMEM75Q8N9X5 138 aa12.98□□□□□ -0.33
HDAC7-227ENST00000548080 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
HDAC7-227ENST00000548080 TRBV6-1A0A0K0K1D8 114 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 PGPEP1LA6NFU8 196 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 ID1P41134 155 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 BAGE2Q86Y30 109 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 SGK494Q96LW2 274 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 MS4A6AQ9H2W1 248 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 RPS10P5Q9NQ39 176 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 DNASE2O00115 360 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-227ENST00000548080 IGLV2-11P01706 119 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 WFDC3Q8IUB2 231 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 OR2K2Q8NGT1 345 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 DCANP1Q8TF63 244 aa12.97□□□□□ -0.33
HDAC7-227ENST00000548080 TGP01266 2768 aa12.96□□□□□ -0.33
HDAC7-227ENST00000548080 IGKV2-40A0A087WW87 121 aaPredicted RBP12.96□□□□□ -0.34
HDAC7-227ENST00000548080 TRAV8-1A0A0A6YYK1 113 aa12.96□□□□□ -0.34
HDAC7-227ENST00000548080 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.34
HDAC7-227ENST00000548080 IGKV2D-40P01614 121 aaPredicted RBP12.96□□□□□ -0.34
HDAC7-227ENST00000548080 IGLV2-8P01709 118 aa12.96□□□□□ -0.34
HDAC7-227ENST00000548080 CD7P09564 240 aa12.96□□□□□ -0.34
HDAC7-227ENST00000548080 PRB4P10163 310 aaPredicted RBP12.96□□□□□ -0.34
HDAC7-227ENST00000548080 PAFAH1B2P68402 229 aa12.96□□□□□ -0.34
HDAC7-227ENST00000548080 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.34
HDAC7-227ENST00000548080 RBPMS2Q6ZRY4 209 aaKnown RBP12.96□□□□□ -0.34
HDAC7-227ENST00000548080 C20orf173Q96LM9 149 aa12.96□□□□□ -0.34
HDAC7-227ENST00000548080 WFDC10AQ9H1F0 79 aa12.96□□□□□ -0.34
HDAC7-227ENST00000548080 PSG8Q9UQ74 426 aa12.96□□□□□ -0.34
HDAC7-227ENST00000548080 RBAKDNA6NC62 111 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 K7EQG2 157 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 LTAP01374 205 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 TFPI2P48307 235 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 PRNTQ86SH4 94 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 Q86TA4 180 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 Q8N1Y9 231 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 ISOC2Q96AB3 205 aa12.95□□□□□ -0.34
HDAC7-227ENST00000548080 A0A087WWC5 75 aa12.94□□□□□ -0.34
HDAC7-227ENST00000548080 K7EN84 100 aa12.94□□□□□ -0.34
HDAC7-227ENST00000548080 MT-ND4LP03901 98 aa12.94□□□□□ -0.34
HDAC7-227ENST00000548080 SMIM12Q96EX1 92 aa12.94□□□□□ -0.34
HDAC7-227ENST00000548080 ZFP30Q9Y2G7 519 aa12.94□□□□□ -0.34
HDAC7-227ENST00000548080 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
HDAC7-227ENST00000548080 TSPAN4O14817 238 aa12.93□□□□□ -0.34
HDAC7-227ENST00000548080 GCGP01275 180 aa12.93□□□□□ -0.34
HDAC7-227ENST00000548080 MGST1P10620 155 aaKnown RBP12.93□□□□□ -0.34
HDAC7-227ENST00000548080 GTSCR1Q86UQ5 136 aa12.93□□□□□ -0.34
HDAC7-227ENST00000548080 NHLRC2Q8NBF2 726 aa12.93□□□□□ -0.34
HDAC7-227ENST00000548080 VGLL1Q99990 258 aa12.93□□□□□ -0.34
HDAC7-227ENST00000548080 TRAV25A0A0B4J276 109 aa12.92□□□□□ -0.34
HDAC7-227ENST00000548080 BTN1A1Q13410 526 aa12.92□□□□□ -0.34
HDAC7-227ENST00000548080 RNF212Q495C1 297 aa12.92□□□□□ -0.34
HDAC7-227ENST00000548080 MLST8Q9BVC4 326 aa12.92□□□□□ -0.34
HDAC7-227ENST00000548080 CTDSP1Q9GZU7 261 aa12.92□□□□□ -0.34
HDAC7-227ENST00000548080 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
HDAC7-227ENST00000548080 OR5I1Q13606 314 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 TMEM183AQ8IXX5 376 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 ANAPC16Q96DE5 110 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 ASCL2Q99929 193 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 IGHV4-30-4P0DP06 118 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 ERCC8Q13216 396 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 FAM24BQ8N5W8 94 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 DEFB125Q8N687 156 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 SFRP2Q96HF1 295 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 AGPAT4-IT1Q9H0P7 198 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 SMCO4Q9NRQ5 59 aa12.91□□□□□ -0.34
HDAC7-227ENST00000548080 PPP1R2P9O14990 202 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 ZNF688P0C7X2 276 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 SAPCD1Q5SSQ6 148 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 TMEM88Q6PEY1 159 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 C9orf47Q6ZRZ4 202 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 OR10G8Q8NGN5 311 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
HDAC7-227ENST00000548080 H7BYZ3 331 aa12.89□□□□□ -0.35
HDAC7-227ENST00000548080 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
HDAC7-227ENST00000548080 ERVFC1-1P60608 527 aa12.89□□□□□ -0.35
HDAC7-227ENST00000548080 PSMG4Q5JS54 123 aa12.89□□□□□ -0.35
HDAC7-227ENST00000548080 CBLN2Q8IUK8 224 aa12.89□□□□□ -0.35
HDAC7-227ENST00000548080 OSTCQ9NRP0 149 aa12.89□□□□□ -0.35
HDAC7-227ENST00000548080 OR4C46A6NHA9 309 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 NPIPB6E9PJ23 425 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 ZNF138P52744 262 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 Q8TAT8 98 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-227ENST00000548080 NDFIP1Q9BT67 221 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
HDAC7-227ENST00000548080 CXorf65A6NEN9 183 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 ZNF705DP0CH99 300 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-227ENST00000548080 ZNF705BP0CI00 300 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-227ENST00000548080 DEFB1P60022 68 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 PRR27Q6MZM9 219 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 FAM231DQ6ZW35 169 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 COX8CQ7Z4L0 72 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms