RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 FAM107AO95990 144 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 CSN2P05814 226 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 MSMBP08118 114 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 ZNF728P0DKX0 622 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 ZNF14P17017 642 aaPredicted RBP2.41□□□□□ -2.02
SCAF11-210ENST00000547654 NFYAP23511 347 aaPredicted RBP2.41□□□□□ -2.02
SCAF11-210ENST00000547654 NFYBP25208 207 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 SRIP30626 198 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 RPL28P46779 137 aaKnown RBP2.41□□□□□ -2.02
SCAF11-210ENST00000547654 GTF2A1P52655 376 aaPredicted RBP2.41□□□□□ -2.02
SCAF11-210ENST00000547654 LY6EQ16553 131 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 TCF24Q7RTU0 167 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 KTN1-AS1Q86SY8 53 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 LHFPL1Q86WI0 220 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 HIST3H2BBQ8N257 126 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 TERB2Q8NHR7 220 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 TMEM106AQ96A25 262 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 LRTM1Q9HBL6 345 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 SPANXCQ9NY87 97 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 RBM7Q9Y580 266 aaKnown RBP2.41□□□□□ -2.02
SCAF11-210ENST00000547654 FAM215AQ9Y5M1 114 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 TLN2Q9Y4G6 2542 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 NSD1Q96L73 2696 aaPredicted RBP2.41□□□□□ -2.02
SCAF11-210ENST00000547654 MEGF8Q7Z7M0 2845 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 MYH8P13535 1937 aa2.4□□□□□ -2.02
SCAF11-210ENST00000547654 KIAA1549LQ6ZVL6 1849 aa2.4□□□□□ -2.02
SCAF11-210ENST00000547654 HRES1P13985 223 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 LINC01554Q52M75 96 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 LYZL1Q6UWQ5 148 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 DPPA3Q6W0C5 159 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 SLC35E3Q7Z769 313 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 IFT20Q8IY31 132 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 TMEM86AQ8N2M4 240 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 C10orf126Q8N4M7 172 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 RPP25LQ8N5L8 163 aaKnown RBP2.4□□□□□ -2.03
SCAF11-210ENST00000547654 OR5J2Q8NH18 312 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 CMTM2Q8TAZ6 248 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 ISOC1Q96CN7 298 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 LAMTOR2Q9Y2Q5 125 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 ASB4Q9Y574 426 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 NUBP2Q9Y5Y2 271 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 MYLKQ15746 1914 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 SDK2Q58EX2 2172 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 F5P12259 2224 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 PCDH15Q96QU1 1955 aa2.4□□□□□ -2.03
SCAF11-210ENST00000547654 DOCK5Q9H7D0 1870 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 ARID1AO14497 2285 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 HELZP42694 1942 aaKnown RBP2.39□□□□□ -2.03
SCAF11-210ENST00000547654 A0A0J9YX75 114 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 ZNF860A6NHJ4 632 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 C19orf84I3L1E1 186 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 KPNA4O00629 521 aaPredicted RBP2.39□□□□□ -2.03
SCAF11-210ENST00000547654 GADD45GO95257 159 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 CSRP1P21291 193 aaKnown RBP2.39□□□□□ -2.03
SCAF11-210ENST00000547654 EVX1P49640 407 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 KISS1Q15726 138 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 ST6GALNAC3Q8NDV1 305 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 OR52R1Q8NGF1 315 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 OR51T1Q8NGJ9 327 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 PPTC7Q8NI37 304 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 SLAMF6Q96DU3 332 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 YPEL2Q96QA6 119 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 DOHHQ9BU89 302 aa2.39□□□□□ -2.03
SCAF11-210ENST00000547654 VPS13CQ709C8 3753 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 MYH1P12882 1939 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 PTPRDP23468 1912 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 ZNF638Q14966 1978 aaKnown RBP2.38□□□□□ -2.03
SCAF11-210ENST00000547654 TRAV7A0A075B6U4 112 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 A0A0D9SG52 128 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 G3V3Q6 166 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 H7C2G1 150 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 ARPC5O15511 151 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 DSCAMO60469 2012 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 GGCTO75223 188 aaKnown RBP2.38□□□□□ -2.03
SCAF11-210ENST00000547654 TCL1BO95988 128 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 PABPC1L2AQ5JQF8 200 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 ANGPTL5Q86XS5 388 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 ZNF561Q8N587 486 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 STAG3L4Q8TBR4 150 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 THEM6Q8WUY1 208 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 CANT1Q8WVQ1 401 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 DEDD2Q8WXF8 326 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 BORCS5Q969J3 196 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 MRPS24Q96EL2 167 aaKnown RBP2.38□□□□□ -2.03
SCAF11-210ENST00000547654 ADAT3Q96EY9 351 aaPredicted RBP2.38□□□□□ -2.03
SCAF11-210ENST00000547654 HIST1H2BLQ99880 126 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 RTL8AQ9BWD3 113 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 OR52A1Q9UKL2 312 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 HHLA3Q9XRX5 114 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 MXRA5Q9NR99 2828 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 CEP192Q8TEP8 1941 aa2.38□□□□□ -2.03
SCAF11-210ENST00000547654 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
SCAF11-210ENST00000547654 PLXND1Q9Y4D7 1925 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 SPAARA0A1B0GVQ0 90 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 PPBPP02775 128 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 FXYD2P54710 66 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 RTL8BQ17RB0 113 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 PRR9Q5T870 116 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 DHFR2Q86XF0 187 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 DYNAPQ8N1N2 210 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms