RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 RCHY1Q96PM5 261 aa16.93■□□□□ 0.3
SMARCD1-203ENST00000547247 TP53TG1Q9Y2A0 90 aa16.93■□□□□ 0.3
SMARCD1-203ENST00000547247 M0R2Z0 102 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 AMBPP02760 352 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 CT45A10P0DMU9 189 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 SPINK13Q1W4C9 94 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 GOLT1AQ6ZVE7 132 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 ZNF680Q8NEM1 530 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 RNF183Q96D59 192 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 ODF3Q96PU9 254 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 MANBALQ9NQG1 85 aa16.92■□□□□ 0.3
SMARCD1-203ENST00000547247 SERTM2A0A1B0GWG4 89 aa16.91■□□□□ 0.3
SMARCD1-203ENST00000547247 SPRY2O43597 315 aa16.91■□□□□ 0.3
SMARCD1-203ENST00000547247 TCRAP04437 139 aa16.91■□□□□ 0.3
SMARCD1-203ENST00000547247 RETNQ9HD89 108 aa16.91■□□□□ 0.3
SMARCD1-203ENST00000547247 GNG13Q9P2W3 67 aa16.91■□□□□ 0.3
SMARCD1-203ENST00000547247 NBEAL2Q6ZNJ1 2754 aa16.9■□□□□ 0.3
SMARCD1-203ENST00000547247 K7EQM0 130 aa16.9■□□□□ 0.3
SMARCD1-203ENST00000547247 TSPOP30536 169 aa16.9■□□□□ 0.3
SMARCD1-203ENST00000547247 CSNK1G2-AS1Q8NCQ2 148 aa16.9■□□□□ 0.3
SMARCD1-203ENST00000547247 OVOL2Q9BRP0 275 aa16.9■□□□□ 0.3
SMARCD1-203ENST00000547247 CDKN1BP46527 198 aa16.89■□□□□ 0.3
SMARCD1-203ENST00000547247 ZNF138P52744 262 aa16.89■□□□□ 0.3
SMARCD1-203ENST00000547247 CCDC28AQ8IWP9 274 aa16.89■□□□□ 0.3
SMARCD1-203ENST00000547247 ATG101Q9BSB4 218 aa16.89■□□□□ 0.3
SMARCD1-203ENST00000547247 ZNF492Q9P255 531 aa16.89■□□□□ 0.3
SMARCD1-203ENST00000547247 LEPP41159 167 aa16.89■□□□□ 0.29
SMARCD1-203ENST00000547247 ATP5G3P48201 142 aa16.89■□□□□ 0.29
SMARCD1-203ENST00000547247 PMS2P11Q13670 270 aa16.89■□□□□ 0.29
SMARCD1-203ENST00000547247 CYB561D1Q8N8Q1 229 aa16.89■□□□□ 0.29
SMARCD1-203ENST00000547247 HIST1H2BAQ96A08 127 aa16.89■□□□□ 0.29
SMARCD1-203ENST00000547247 IGF2BP2-AS1Q96M15 143 aa16.89■□□□□ 0.29
SMARCD1-203ENST00000547247 TCEAL7Q9BRU2 100 aa16.89■□□□□ 0.29
SMARCD1-203ENST00000547247 HUWE1Q7Z6Z7 4374 aaKnown RBP16.88■□□□□ 0.29
SMARCD1-203ENST00000547247 IFNA1P01562 189 aa16.88■□□□□ 0.29
SMARCD1-203ENST00000547247 LYPD6BQ8NI32 183 aa16.88■□□□□ 0.29
SMARCD1-203ENST00000547247 F6UZH7 168 aa16.87■□□□□ 0.29
SMARCD1-203ENST00000547247 CRXO43186 299 aaPredicted RBP16.87■□□□□ 0.29
SMARCD1-203ENST00000547247 Q8TAT8 98 aa16.87■□□□□ 0.29
SMARCD1-203ENST00000547247 TRAV12-2A0A075B6T6 113 aa16.86■□□□□ 0.29
SMARCD1-203ENST00000547247 TRAV8-1A0A0A6YYK1 113 aa16.86■□□□□ 0.29
SMARCD1-203ENST00000547247 C11orf94C9JXX5 98 aa16.86■□□□□ 0.29
SMARCD1-203ENST00000547247 PEX7O00628 323 aa16.86■□□□□ 0.29
SMARCD1-203ENST00000547247 FAM19A4Q96LR4 140 aa16.86■□□□□ 0.29
SMARCD1-203ENST00000547247 TRBV7-9A0A0J9YWB2 115 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 INSP01308 110 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 RARRES2Q99969 163 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 TXNDC17Q9BRA2 123 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 LENEPQ9Y5L5 61 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 J3KRW8 73 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 CRISP2P16562 243 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 OR11H2Q8NH07 326 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 U3KQK5 164 aa16.85■□□□□ 0.29
SMARCD1-203ENST00000547247 FBLL1A6NHQ2 334 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-203ENST00000547247 NMBP08949 121 aa16.84■□□□□ 0.29
SMARCD1-203ENST00000547247 TAGLN2P37802 199 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-203ENST00000547247 KIR3DS1Q14943 382 aa16.84■□□□□ 0.29
SMARCD1-203ENST00000547247 TMEM75Q8N9X5 138 aa16.84■□□□□ 0.29
SMARCD1-203ENST00000547247 SGK494Q96LW2 274 aa16.84■□□□□ 0.29
SMARCD1-203ENST00000547247 GOLT1BQ9Y3E0 138 aa16.84■□□□□ 0.29
SMARCD1-203ENST00000547247 BCL2P10415 239 aa16.83■□□□□ 0.28
SMARCD1-203ENST00000547247 FLI1Q01543 452 aaPredicted RBP16.83■□□□□ 0.28
SMARCD1-203ENST00000547247 C1orf158Q8N1D5 194 aa16.83■□□□□ 0.28
SMARCD1-203ENST00000547247 IGHV3OR16-12A0A075B7B8 117 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 KLLNB2CW77 178 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 GPX1P07203 203 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 GFI1BQ5VTD9 330 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 ZNF705AQ6ZN79 300 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 ZFAND2AQ8N6M9 145 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 LINC00479Q96M42 142 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 TMEM208Q9BTX3 173 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 PSG8Q9UQ74 426 aa16.82■□□□□ 0.28
SMARCD1-203ENST00000547247 TRAV34A0A0B4J273 112 aa16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 IGLV2-11P01706 119 aa16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 MEF2BQ02080 365 aaPredicted RBP16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 PCNPQ8WW12 178 aaKnown RBP16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 C20orf144Q9BQM9 153 aa16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 NDFIP1Q9BT67 221 aa16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 VAX2Q9UIW0 290 aa16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 SCO2A0A1W2PP80 73 aa16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 PRNTQ86SH4 94 aa16.81■□□□□ 0.28
SMARCD1-203ENST00000547247 TENM3Q9P273 2699 aa16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 C7orf71A4D174 169 aa16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 RBMY1A1P0DJD3 496 aaKnown RBP16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 RBMY1CP0DJD4 496 aa16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 AKR1C3P42330 323 aa16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 RBMY1FQ15415 496 aaKnown RBP16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 TREM1Q9NP99 234 aa16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 X6R8D5 127 aa16.8■□□□□ 0.28
SMARCD1-203ENST00000547247 TRAV12-3A0A0B4J271 114 aa16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 LOC102723971A0A1B0GUV8 181 aa16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 RNASE4P34096 147 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 UBE2G1P62253 170 aa16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 TMEM256Q8N2U0 113 aa16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 TVP23CQ96ET8 276 aa16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 FMC1Q96HJ9 113 aa16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 KLF12Q9Y4X4 402 aa16.79■□□□□ 0.28
SMARCD1-203ENST00000547247 PDE6DO43924 150 aa16.78■□□□□ 0.28
SMARCD1-203ENST00000547247 BTN1A1Q13410 526 aa16.78■□□□□ 0.28
SMARCD1-203ENST00000547247 C2CD4CQ8TF44 421 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms