RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 C10orf113Q5VZT2 155 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 RBPMS2Q6ZRY4 209 aaKnown RBP12.9□□□□□ -0.34
BRF1-208ENST00000546997 NPBQ8NG41 125 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 EPDR1Q9UM22 224 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
BRF1-208ENST00000546997 TRAV8-6A0A0B4J262 113 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 C19orf71A6NCJ1 209 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 GAGE10A6NGK3 116 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 NDUFA3O95167 84 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 SSBP2P81877 361 aaPredicted RBP12.9□□□□□ -0.34
BRF1-208ENST00000546997 IL17RELQ6ZVW7 336 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 BPIFA4PQ86YQ2 179 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 FXYD5Q96DB9 178 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 LINC00479Q96M42 142 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 CUBNO60494 3623 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 C7orf71A4D174 169 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 A6NDN8 102 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 G3V4G9 280 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 COX7A2P2O60397 106 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 TMEM97Q5BJF2 176 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 OR1N2Q8NGR9 330 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 NCBP2LA6PVI3 153 aaKnown RBP12.89□□□□□ -0.35
BRF1-208ENST00000546997 HAX1O00165 279 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 PLGLAQ15195 96 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 DEFB112Q30KQ8 113 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 TMEM219Q86XT9 240 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 THAP8Q8NA92 274 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 GATD1Q8NB37 220 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 SMR3AQ99954 134 aa12.89□□□□□ -0.35
BRF1-208ENST00000546997 C9orf118A6NHY6 69 aa12.88□□□□□ -0.35
BRF1-208ENST00000546997 SIVA1O15304 175 aa12.88□□□□□ -0.35
BRF1-208ENST00000546997 FOXA3P55318 350 aaPredicted RBP12.88□□□□□ -0.35
BRF1-208ENST00000546997 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
BRF1-208ENST00000546997 C2orf91Q6ZV80 131 aa12.88□□□□□ -0.35
BRF1-208ENST00000546997 NPIPB3Q92617 1050 aa12.88□□□□□ -0.35
BRF1-208ENST00000546997 HIVEP2P31629 2446 aa12.88□□□□□ -0.35
BRF1-208ENST00000546997 TCRBV4S1A1TA0A5B7 111 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 TEX22C9J3V5 150 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 NPIPB6E9PJ23 425 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 H3BUX3 64 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 P01737 135 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
BRF1-208ENST00000546997 IGKV1D-37A0A075B6S9 117 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 TRAV5A0A0B4J249 113 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 A0A1B0GW15 77 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 CYSRT1A8MQ03 144 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 LTAP01374 205 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 IGHV3-48P01763 117 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 LINC00173Q6ZV60 143 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 C9orf139Q6ZV77 190 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
BRF1-208ENST00000546997 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.86□□□□□ -0.35
BRF1-208ENST00000546997 SH2D7A6NKC9 451 aaPredicted RBP12.86□□□□□ -0.35
BRF1-208ENST00000546997 CRYGCP07315 174 aa12.86□□□□□ -0.35
BRF1-208ENST00000546997 APELAP0DMC3 54 aa12.86□□□□□ -0.35
BRF1-208ENST00000546997 MORN5Q5VZ52 161 aa12.86□□□□□ -0.35
BRF1-208ENST00000546997 Q8N9W7 124 aa12.86□□□□□ -0.35
BRF1-208ENST00000546997 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
BRF1-208ENST00000546997 YAE1D1Q9NRH1 226 aa12.86□□□□□ -0.35
BRF1-208ENST00000546997 NSD1Q96L73 2696 aaPredicted RBP12.86□□□□□ -0.35
BRF1-208ENST00000546997 A0A087X0K7 114 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 K7EP34 96 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 CHEK1O14757 476 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 CSN1S1P47710 185 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 LY6EQ16553 131 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 PSMG4Q5JS54 123 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 NEGR1Q7Z3B1 354 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 C5orf17Q8NAS9 161 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 OR9G4Q8NGQ1 327 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 GTSF1Q8WW33 167 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 SRSF12Q8WXF0 261 aaKnown RBP12.85□□□□□ -0.35
BRF1-208ENST00000546997 ZNF48Q96MX3 618 aaPredicted RBP12.85□□□□□ -0.35
BRF1-208ENST00000546997 TRBV6-1A0A0K0K1D8 114 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 PYYP10082 97 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 PATE2Q6UY27 113 aa12.85□□□□□ -0.35
BRF1-208ENST00000546997 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
BRF1-208ENST00000546997 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
BRF1-208ENST00000546997 SLC25A5P05141 298 aaKnown RBP12.84□□□□□ -0.35
BRF1-208ENST00000546997 ERASQ7Z444 233 aa12.84□□□□□ -0.35
BRF1-208ENST00000546997 OR1B1Q8NGR6 318 aa12.84□□□□□ -0.35
BRF1-208ENST00000546997 ZNF747Q9BV97 191 aa12.84□□□□□ -0.35
BRF1-208ENST00000546997 NF1P21359 2839 aa12.83□□□□□ -0.35
BRF1-208ENST00000546997 SCGB1A1P11684 91 aa12.83□□□□□ -0.35
BRF1-208ENST00000546997 NDPQ00604 133 aa12.83□□□□□ -0.35
BRF1-208ENST00000546997 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.35
BRF1-208ENST00000546997 F8P00451 2351 aa12.83□□□□□ -0.36
BRF1-208ENST00000546997 A6NDX4 124 aa12.83□□□□□ -0.36
BRF1-208ENST00000546997 APOHP02749 345 aaPredicted RBP12.83□□□□□ -0.36
BRF1-208ENST00000546997 HSD52Q0P140 79 aa12.83□□□□□ -0.36
BRF1-208ENST00000546997 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.36
BRF1-208ENST00000546997 TMEM116Q8NCL8 245 aa12.83□□□□□ -0.36
BRF1-208ENST00000546997 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
BRF1-208ENST00000546997 OR10AG1Q8NH19 301 aa12.83□□□□□ -0.36
BRF1-208ENST00000546997 AP5S1Q9NUS5 200 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms