RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
CCDC38-203ENST00000546803 C3orf84H3BNL1 204 aa12.16□□□□□ -0.46
CCDC38-203ENST00000546803 ERCC8Q13216 396 aa12.16□□□□□ -0.46
CCDC38-203ENST00000546803 TMEM256Q8N2U0 113 aa12.16□□□□□ -0.46
CCDC38-203ENST00000546803 C20orf144Q9BQM9 153 aa12.16□□□□□ -0.46
CCDC38-203ENST00000546803 TMEM208Q9BTX3 173 aa12.16□□□□□ -0.46
CCDC38-203ENST00000546803 TRAV12-2A0A075B6T6 113 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 TRBV7-9A0A0J9YWB2 115 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 HBE1P02100 147 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 NMBP08949 121 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 FHITP49789 147 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 RAB5CP51148 216 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 C5orf17Q8NAS9 161 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 VGLL1Q99990 258 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 ZNF492Q9P255 531 aa12.15□□□□□ -0.46
CCDC38-203ENST00000546803 SERTM2A0A1B0GWG4 89 aa12.14□□□□□ -0.47
CCDC38-203ENST00000546803 TMEM189A5PLL7 270 aa12.14□□□□□ -0.47
CCDC38-203ENST00000546803 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
CCDC38-203ENST00000546803 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
CCDC38-203ENST00000546803 ZNF138P52744 262 aa12.14□□□□□ -0.47
CCDC38-203ENST00000546803 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
CCDC38-203ENST00000546803 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
CCDC38-203ENST00000546803 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
CCDC38-203ENST00000546803 FAM19A4Q96LR4 140 aa12.14□□□□□ -0.47
CCDC38-203ENST00000546803 NKX6-2Q9C056 277 aaPredicted RBP12.14□□□□□ -0.47
CCDC38-203ENST00000546803 COL7A1Q02388 2944 aa12.14□□□□□ -0.47
CCDC38-203ENST00000546803 CRISP2P16562 243 aa12.13□□□□□ -0.47
CCDC38-203ENST00000546803 SUMO1P63165 101 aaKnown RBP12.13□□□□□ -0.47
CCDC38-203ENST00000546803 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
CCDC38-203ENST00000546803 LINC01587Q99440 93 aa12.13□□□□□ -0.47
CCDC38-203ENST00000546803 TMPRSS5Q9H3S3 457 aa12.13□□□□□ -0.47
CCDC38-203ENST00000546803 LENEPQ9Y5L5 61 aa12.13□□□□□ -0.47
CCDC38-203ENST00000546803 KLLNB2CW77 178 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 H7BYZ3 331 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 DEFB4AO15263 64 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 H2AFB1P0C5Y9 115 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 TAS2R60P59551 318 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 GFI1BQ5VTD9 330 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 EPDR1Q9UM22 224 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 RPH3ALQ9UNE2 315 aa12.12□□□□□ -0.47
CCDC38-203ENST00000546803 NBEAL2Q6ZNJ1 2754 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 K7EQM0 130 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 SULT1A2P50226 295 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 KIR3DS1Q14943 382 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 GOLT1AQ6ZVE7 132 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 C11orf45Q8TAV5 145 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 ARL2-SNX15V9GYD0 113 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 TENM3Q9P273 2699 aa12.11□□□□□ -0.47
CCDC38-203ENST00000546803 STAB2Q8WWQ8 2551 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 LOC102723971A0A1B0GUV8 181 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 C7orf71A4D174 169 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 J3KRW8 73 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 TCRAP04437 139 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 GPX1P07203 203 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 GNG5P63218 68 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 ZFAND2AQ8N6M9 145 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 Q8TAT8 98 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 NIPSNAP3BQ9BS92 247 aa12.1□□□□□ -0.47
CCDC38-203ENST00000546803 YTHDF2Q9Y5A9 579 aaKnown RBP12.1□□□□□ -0.47
CCDC38-203ENST00000546803 TRAV12-3A0A0B4J271 114 aa12.09□□□□□ -0.47
CCDC38-203ENST00000546803 FBLL1A6NHQ2 334 aaKnown RBP12.09□□□□□ -0.47
CCDC38-203ENST00000546803 ZNF705GA8MUZ8 300 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-203ENST00000546803 TEX46H3BTG2 121 aa12.09□□□□□ -0.47
CCDC38-203ENST00000546803 IFNA7P01567 189 aa12.09□□□□□ -0.47
CCDC38-203ENST00000546803 PPT1P50897 306 aa12.09□□□□□ -0.47
CCDC38-203ENST00000546803 UBE2G2P60604 165 aa12.09□□□□□ -0.47
CCDC38-203ENST00000546803 ATG101Q9BSB4 218 aa12.09□□□□□ -0.47
CCDC38-203ENST00000546803 TRAV1-1A0A0B4J248 108 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 TEX48A0A1B0GUV7 120 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 RNASE4P34096 147 aaKnown RBP12.08□□□□□ -0.48
CCDC38-203ENST00000546803 NKX2-5P52952 324 aaPredicted RBP12.08□□□□□ -0.48
CCDC38-203ENST00000546803 CASC10Q5T4H9 136 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 ZNF493Q6ZR52 646 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 CYB561D1Q8N8Q1 229 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 PYGO2Q9BRQ0 406 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 TCEAL7Q9BRU2 100 aa12.08□□□□□ -0.48
CCDC38-203ENST00000546803 ZNF324O75467 553 aaPredicted RBP12.07□□□□□ -0.48
CCDC38-203ENST00000546803 SPART-AS1P0CW21 52 aa12.07□□□□□ -0.48
CCDC38-203ENST00000546803 BTN1A1Q13410 526 aa12.07□□□□□ -0.48
CCDC38-203ENST00000546803 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
CCDC38-203ENST00000546803 HIST1H2BAQ96A08 127 aa12.07□□□□□ -0.48
CCDC38-203ENST00000546803 TRAV8-1A0A0A6YYK1 113 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 F6UZH7 168 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 HTN1P15515 57 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 EMP1P54849 157 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 NANOS2P60321 138 aaKnown RBP12.06□□□□□ -0.48
CCDC38-203ENST00000546803 CST9LP1Q5W188 147 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 CCDC28AQ8IWP9 274 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 C16orf74Q96GX8 76 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 NDFIP1Q9BT67 221 aa12.06□□□□□ -0.48
CCDC38-203ENST00000546803 A0A1B0GV50 99 aa12.05□□□□□ -0.48
CCDC38-203ENST00000546803 PEX7O00628 323 aa12.05□□□□□ -0.48
CCDC38-203ENST00000546803 PAGE4O60829 102 aa12.05□□□□□ -0.48
CCDC38-203ENST00000546803 PRM2P04554 102 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms