RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 UFC1Q9Y3C8 167 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.38
VPS29-203ENST00000546588 A0A1W2PRE2 83 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 TMEM218A2RU14 115 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 RBFOX3A6NFN3 312 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 SMIM9A6NGZ8 99 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 TMEM250H0YL14 139 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 NDUFA4O00483 81 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 COX7A2P2O60397 106 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 HYPMO75409 117 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 CRLF1O75462 422 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 HSBP1O75506 76 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 IFNA1P01562 189 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 IGHV3-48P01763 117 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 ARL14EPLP0DKL9 152 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 ADCYAP1P18509 176 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 GCHFRP30047 84 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 ATP5G2Q06055 141 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 MORN5Q5VZ52 161 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 SIGLEC15Q6ZMC9 328 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 MIR17HGQ75NE6 70 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 LINC00305Q7Z4B0 112 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 SMIM20Q8N5G0 67 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 SHANK2-AS3Q9BTD1 123 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 SEC11CQ9BY50 192 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 KLK15Q9H2R5 256 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 TMEM167BQ9NRX6 74 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 VAX2Q9UIW0 290 aa6.45□□□□□ -1.38
VPS29-203ENST00000546588 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 IGHV3-21A0A0B4J1V1 117 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 CLPSL1A2RUU4 121 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 OR2T8A6NH00 312 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 F5H768 121 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 PPP1R2P9O14990 202 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 ZNF253O75346 499 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 SLPIP03973 132 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 IL4P05112 153 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 SNRPCP09234 159 aaKnown RBP6.44□□□□□ -1.38
VPS29-203ENST00000546588 LGALS1P09382 135 aaKnown RBP6.44□□□□□ -1.38
VPS29-203ENST00000546588 CRYBB3P26998 211 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 MYCNOSP40205 109 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 CDX1P47902 265 aaPredicted RBP6.44□□□□□ -1.38
VPS29-203ENST00000546588 TCTAP57738 103 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 TPPP2P59282 170 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 DEFA5Q01523 94 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 MEF2BQ02080 365 aaPredicted RBP6.44□□□□□ -1.38
VPS29-203ENST00000546588 FOXI1Q12951 378 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 OR5I1Q13606 314 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 PDE6HQ13956 83 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 PEA15Q15121 130 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 Q56UQ5 140 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 C1orf194Q5T5A4 169 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 SPATA31B1PQ5VZV4 182 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 LCN15Q6UWW0 184 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 Q8WTZ3 238 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 C11orf52Q96A22 123 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 FXYD5Q96DB9 178 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 SLC25A39Q9BZJ4 359 aaPredicted RBP6.44□□□□□ -1.38
VPS29-203ENST00000546588 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 ZNF355PQ9NSJ1 428 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 SS18L2Q9UHA2 77 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 LINC00527Q9UJ94 153 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 HIGD1AQ9Y241 93 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 V9GYY9 64 aa6.44□□□□□ -1.38
VPS29-203ENST00000546588 HIVEP1P15822 2718 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 BAHCC1Q9P281 2608 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 ACANP16112 2415 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 A0A087X0K7 114 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 C9JQL5 133 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 USP17L23D6RBM5 183 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 BMPR1BO00238 502 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 SRP19P09132 144 aaKnown RBP6.43□□□□□ -1.38
VPS29-203ENST00000546588 IGLC2P0DOY2 106 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 GPR183P32249 361 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 FAM159AQ6UWV7 190 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 TOMM20LQ6UXN7 152 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 GPHB5Q86YW7 130 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 OR5AU1Q8NGC0 362 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 ISOC2Q96AB3 205 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 UHRF2Q96PU4 802 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
VPS29-203ENST00000546588 TLN2Q9Y4G6 2542 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 INAFM1C9JVW0 142 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 K7EMT4 169 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 LGALS9O00182 355 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 BUB3O43684 328 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 HIST1H1EP10412 219 aaKnown RBP6.42□□□□□ -1.38
VPS29-203ENST00000546588 GAGE5Q13069 117 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 GAGE6Q13070 117 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 CLEC19AQ6UXS0 136 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 LYPD1Q8N2G4 141 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 KLHDC1Q8N7A1 406 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 OR4X2Q8NGF9 303 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 OR1B1Q8NGR6 318 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 LINC01006Q8NI28 216 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 RXFP4Q8TDU9 374 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 C4orf3Q8WVX3 66 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 GPR82Q96P67 336 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 MS4A10Q96PG2 267 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms