RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 GCHFRP30047 84 aa11.32□□□□□ -0.6
SCRIB-208ENST00000546337 TAS2R60P59551 318 aa11.32□□□□□ -0.6
SCRIB-208ENST00000546337 EIF5AL1Q6IS14 154 aaKnown RBP11.32□□□□□ -0.6
SCRIB-208ENST00000546337 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
SCRIB-208ENST00000546337 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
SCRIB-208ENST00000546337 ZNF471Q9BX82 626 aaPredicted RBP11.32□□□□□ -0.6
SCRIB-208ENST00000546337 NKX6-2Q9C056 277 aaPredicted RBP11.32□□□□□ -0.6
SCRIB-208ENST00000546337 CXorf65A6NEN9 183 aa11.31□□□□□ -0.6
SCRIB-208ENST00000546337 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
SCRIB-208ENST00000546337 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
SCRIB-208ENST00000546337 C11orf94C9JXX5 98 aa11.31□□□□□ -0.6
SCRIB-208ENST00000546337 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
SCRIB-208ENST00000546337 ZNF138P52744 262 aa11.31□□□□□ -0.6
SCRIB-208ENST00000546337 STOML3Q8TAV4 291 aa11.31□□□□□ -0.6
SCRIB-208ENST00000546337 ZNF492Q9P255 531 aa11.31□□□□□ -0.6
SCRIB-208ENST00000546337 KLK5Q9Y337 293 aaPredicted RBP11.31□□□□□ -0.6
SCRIB-208ENST00000546337 IGHV3OR16-12A0A075B7B8 117 aa11.3□□□□□ -0.6
SCRIB-208ENST00000546337 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
SCRIB-208ENST00000546337 KLLNB2CW77 178 aa11.3□□□□□ -0.6
SCRIB-208ENST00000546337 SPART-AS1P0CW21 52 aa11.3□□□□□ -0.6
SCRIB-208ENST00000546337 LGALSLQ3ZCW2 172 aaPredicted RBP11.3□□□□□ -0.6
SCRIB-208ENST00000546337 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
SCRIB-208ENST00000546337 C5orf17Q8NAS9 161 aa11.3□□□□□ -0.6
SCRIB-208ENST00000546337 LINC01587Q99440 93 aa11.3□□□□□ -0.6
SCRIB-208ENST00000546337 LINC00467Q9BRT7 94 aa11.3□□□□□ -0.6
SCRIB-208ENST00000546337 LOC102723971A0A1B0GUV8 181 aa11.29□□□□□ -0.6
SCRIB-208ENST00000546337 HMGB3O15347 200 aaKnown RBP11.29□□□□□ -0.6
SCRIB-208ENST00000546337 RAB5CP51148 216 aa11.29□□□□□ -0.6
SCRIB-208ENST00000546337 TCTAP57738 103 aa11.29□□□□□ -0.6
SCRIB-208ENST00000546337 MBD3L1Q8WWY6 194 aa11.29□□□□□ -0.6
SCRIB-208ENST00000546337 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
SCRIB-208ENST00000546337 NIPSNAP3BQ9BS92 247 aa11.29□□□□□ -0.6
SCRIB-208ENST00000546337 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 K7EQM0 130 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 DEFB4AO15263 64 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 ERCC8Q13216 396 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 ZNF726P1Q15940 193 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 GFI1BQ5VTD9 330 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 ZFAND6Q6FIF0 208 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 VGLL1Q99990 258 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 ARL2-SNX15V9GYD0 113 aa11.28□□□□□ -0.6
SCRIB-208ENST00000546337 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
SCRIB-208ENST00000546337 C7orf71A4D174 169 aa11.27□□□□□ -0.61
SCRIB-208ENST00000546337 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
SCRIB-208ENST00000546337 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
SCRIB-208ENST00000546337 SLC51BQ86UW2 128 aa11.27□□□□□ -0.61
SCRIB-208ENST00000546337 PHLDA1Q8WV24 401 aaPredicted RBP11.27□□□□□ -0.61
SCRIB-208ENST00000546337 TCEAL7Q9BRU2 100 aa11.27□□□□□ -0.61
SCRIB-208ENST00000546337 MAP1LC3B2A6NCE7 125 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
SCRIB-208ENST00000546337 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCRIB-208ENST00000546337 GPX1P07203 203 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 FHITP49789 147 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 NANOS2P60321 138 aaKnown RBP11.26□□□□□ -0.61
SCRIB-208ENST00000546337 SUMO1P63165 101 aaKnown RBP11.26□□□□□ -0.61
SCRIB-208ENST00000546337 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 C16orf74Q96GX8 76 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 MAP1LC3BQ9GZQ8 125 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
SCRIB-208ENST00000546337 TRAV10A0A0B4J240 114 aa11.25□□□□□ -0.61
SCRIB-208ENST00000546337 ZNF705GA8MUZ8 300 aaPredicted RBP11.25□□□□□ -0.61
SCRIB-208ENST00000546337 PPT1P50897 306 aa11.25□□□□□ -0.61
SCRIB-208ENST00000546337 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
SCRIB-208ENST00000546337 TMEM263Q8WUH6 116 aaKnown RBP11.25□□□□□ -0.61
SCRIB-208ENST00000546337 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 TCRAP04437 139 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 PMS2P11Q13670 270 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 ANXA2RQ3ZCQ2 193 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 ZFP69Q49AA0 526 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 HIST1H2BAQ96A08 127 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 FAM210BQ96KR6 192 aa11.24□□□□□ -0.61
SCRIB-208ENST00000546337 YTHDF2Q9Y5A9 579 aaKnown RBP11.24□□□□□ -0.61
SCRIB-208ENST00000546337 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
SCRIB-208ENST00000546337 CSMD3Q7Z407 3707 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 TRAV1-1A0A0B4J248 108 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 F6UZH7 168 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 TEX46H3BTG2 121 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 H2AFB1P0C5Y9 115 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
SCRIB-208ENST00000546337 KIR3DS1Q14943 382 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 FAM222AQ5U5X8 452 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 IQCF2Q8IXL9 164 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 NDFIP1Q9BT67 221 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 STARD9Q9P2P6 4700 aa11.23□□□□□ -0.61
SCRIB-208ENST00000546337 FAM74A7A6NL05 159 aa11.22□□□□□ -0.61
SCRIB-208ENST00000546337 GGTLC3B5MD39 225 aa11.22□□□□□ -0.61
SCRIB-208ENST00000546337 AZU1P20160 251 aa11.22□□□□□ -0.61
SCRIB-208ENST00000546337 EMP1P54849 157 aa11.22□□□□□ -0.61
SCRIB-208ENST00000546337 SAPCD1Q5SSQ6 148 aa11.22□□□□□ -0.61
SCRIB-208ENST00000546337 Q6AWC8 147 aa11.22□□□□□ -0.61
SCRIB-208ENST00000546337 EIF4E3Q8N5X7 224 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms