RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 HBE1P02100 147 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 FHITP49789 147 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 SLC51BQ86UW2 128 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 Q8NAQ8 132 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 ODF3Q96PU9 254 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 LINC01587Q99440 93 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 NEU1Q99519 415 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 C11orf68Q9H3H3 251 aaKnown RBP12.17□□□□□ -0.46
LTBR-215ENST00000546296 PLA2G2EQ9NZK7 142 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
LTBR-215ENST00000546296 SLC25A5P05141 298 aaKnown RBP12.16□□□□□ -0.46
LTBR-215ENST00000546296 RBMY1A1P0DJD3 496 aaKnown RBP12.16□□□□□ -0.46
LTBR-215ENST00000546296 RBMY1CP0DJD4 496 aa12.16□□□□□ -0.46
LTBR-215ENST00000546296 RBMY1FQ15415 496 aaKnown RBP12.16□□□□□ -0.46
LTBR-215ENST00000546296 ZFAND6Q6FIF0 208 aa12.16□□□□□ -0.46
LTBR-215ENST00000546296 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
LTBR-215ENST00000546296 TMPRSS5Q9H3S3 457 aa12.16□□□□□ -0.46
LTBR-215ENST00000546296 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
LTBR-215ENST00000546296 ZNF138P52744 262 aa12.15□□□□□ -0.46
LTBR-215ENST00000546296 RRN3P1Q2M238 152 aa12.15□□□□□ -0.46
LTBR-215ENST00000546296 DPPA3Q6W0C5 159 aa12.15□□□□□ -0.46
LTBR-215ENST00000546296 GOLT1AQ6ZVE7 132 aa12.15□□□□□ -0.46
LTBR-215ENST00000546296 TMEM256Q8N2U0 113 aa12.15□□□□□ -0.46
LTBR-215ENST00000546296 SFT2D1Q8WV19 159 aa12.15□□□□□ -0.46
LTBR-215ENST00000546296 ZNF705GA8MUZ8 300 aaPredicted RBP12.14□□□□□ -0.47
LTBR-215ENST00000546296 EMP1P54849 157 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 UBE2G2P60604 165 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 SUMO1P63165 101 aaKnown RBP12.14□□□□□ -0.47
LTBR-215ENST00000546296 GNG5P63218 68 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 KIR3DS1Q14943 382 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 GFI1BQ5VTD9 330 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 ARL6IP6Q8N6S5 226 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
LTBR-215ENST00000546296 TRAV12-3A0A0B4J271 114 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 A0A1B0GV50 99 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 TMEM189A5PLL7 270 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 CXorf65A6NEN9 183 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 GPX1P07203 203 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 H2AFB1P0C5Y9 115 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 HTN1P15515 57 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 RNASE4P34096 147 aaKnown RBP12.13□□□□□ -0.47
LTBR-215ENST00000546296 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 C5orf17Q8NAS9 161 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 Q8TAT8 98 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 DNAH7Q8WXX0 4024 aa12.13□□□□□ -0.47
LTBR-215ENST00000546296 LOC102723971A0A1B0GUV8 181 aa12.12□□□□□ -0.47
LTBR-215ENST00000546296 H7BYZ3 331 aa12.12□□□□□ -0.47
LTBR-215ENST00000546296 K7EQM0 130 aa12.12□□□□□ -0.47
LTBR-215ENST00000546296 IFNA7P01567 189 aa12.12□□□□□ -0.47
LTBR-215ENST00000546296 RAB5CP51148 216 aa12.12□□□□□ -0.47
LTBR-215ENST00000546296 NKX2-5P52952 324 aaPredicted RBP12.12□□□□□ -0.47
LTBR-215ENST00000546296 FAM19A4Q96LR4 140 aa12.12□□□□□ -0.47
LTBR-215ENST00000546296 NIPSNAP3BQ9BS92 247 aa12.12□□□□□ -0.47
LTBR-215ENST00000546296 YTHDF2Q9Y5A9 579 aaKnown RBP12.12□□□□□ -0.47
LTBR-215ENST00000546296 C7orf71A4D174 169 aa12.11□□□□□ -0.47
LTBR-215ENST00000546296 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
LTBR-215ENST00000546296 PRM2P04554 102 aa12.11□□□□□ -0.47
LTBR-215ENST00000546296 NMBP08949 121 aa12.11□□□□□ -0.47
LTBR-215ENST00000546296 CRISP2P16562 243 aa12.11□□□□□ -0.47
LTBR-215ENST00000546296 TAS2R60P59551 318 aa12.11□□□□□ -0.47
LTBR-215ENST00000546296 NANOS2P60321 138 aaKnown RBP12.11□□□□□ -0.47
LTBR-215ENST00000546296 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
LTBR-215ENST00000546296 EPDR1Q9UM22 224 aa12.11□□□□□ -0.47
LTBR-215ENST00000546296 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 KLLNB2CW77 178 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 TCRAP04437 139 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 BTN1A1Q13410 526 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 CASC10Q5T4H9 136 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 CST9LP1Q5W188 147 aa12.1□□□□□ -0.47
LTBR-215ENST00000546296 SPART-AS1P0CW21 52 aa12.09□□□□□ -0.47
LTBR-215ENST00000546296 SULT1A2P50226 295 aa12.09□□□□□ -0.47
LTBR-215ENST00000546296 CCDC28AQ8IWP9 274 aa12.09□□□□□ -0.47
LTBR-215ENST00000546296 ZFAND2AQ8N6M9 145 aa12.09□□□□□ -0.47
LTBR-215ENST00000546296 SGK494Q96LW2 274 aa12.09□□□□□ -0.47
LTBR-215ENST00000546296 LENEPQ9Y5L5 61 aa12.09□□□□□ -0.47
LTBR-215ENST00000546296 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
LTBR-215ENST00000546296 TEX46H3BTG2 121 aa12.08□□□□□ -0.48
LTBR-215ENST00000546296 AZU1P20160 251 aa12.08□□□□□ -0.48
LTBR-215ENST00000546296 CYB561D1Q8N8Q1 229 aa12.08□□□□□ -0.48
LTBR-215ENST00000546296 ATG101Q9BSB4 218 aa12.08□□□□□ -0.48
LTBR-215ENST00000546296 PAGE4O60829 102 aa12.07□□□□□ -0.48
LTBR-215ENST00000546296 PPT1P50897 306 aa12.07□□□□□ -0.48
LTBR-215ENST00000546296 PYGO2Q9BRQ0 406 aa12.07□□□□□ -0.48
LTBR-215ENST00000546296 NDFIP1Q9BT67 221 aa12.07□□□□□ -0.48
LTBR-215ENST00000546296 CELA1Q9UNI1 258 aa12.07□□□□□ -0.48
LTBR-215ENST00000546296 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
LTBR-215ENST00000546296 F6UZH7 168 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 PEX7O00628 323 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 ZNF324O75467 553 aaPredicted RBP12.06□□□□□ -0.48
LTBR-215ENST00000546296 PRR9Q5T870 116 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 FAM222AQ5U5X8 452 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 ZNF493Q6ZR52 646 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms