RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 LINC00322Q6ZN03 302 aaPredicted RBP7.78□□□□□ -1.16
TRAF1-203ENST00000546084 VMO1Q7Z5L0 202 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 Q8NA96 180 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 NRGNQ92686 78 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 C16orf92Q96LL3 132 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 BPESC1Q9GZL8 116 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 A0A1B0GUT8 65 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 SHISA9B4DS77 424 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 FAM71F2Q6NXP2 309 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 C12orf54Q6X4T0 127 aa7.78□□□□□ -1.16
TRAF1-203ENST00000546084 IGHV2-70DA0A0C4DH43 119 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 IGLC7A0M8Q6 106 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 FNDC10F2Z333 226 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 FAM74A4Q5TZK3 123 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 ZNF833PQ6ZTB9 187 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 FXYD5Q96DB9 178 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 FLNBO75369 2602 aaKnown RBP7.77□□□□□ -1.17
TRAF1-203ENST00000546084 FLNCQ14315 2725 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 TRAV40A0A0B4J280 105 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 IGHV1-24A0A0C4DH33 117 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 C2orf70A6NJV1 201 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 FAM120AOSQ5T036 256 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 HIST2H2BDQ6DRA6 164 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 RBPMS2Q6ZRY4 209 aaKnown RBP7.77□□□□□ -1.17
TRAF1-203ENST00000546084 C8orf46Q8TAG6 207 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 TNRC6BQ9UPQ9 1833 aaKnown RBP7.77□□□□□ -1.17
TRAF1-203ENST00000546084 D6R8Y8 96 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 GATA4P43694 442 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 TTC32Q5I0X7 151 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 RASL11AQ6T310 242 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 LYZL1Q6UWQ5 148 aa7.77□□□□□ -1.17
TRAF1-203ENST00000546084 TRAV8-6A0A0B4J262 113 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 K7EMI3 77 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 FAM106CPP0CH98 169 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 ATP5IP56385 69 aaPredicted RBP7.76□□□□□ -1.17
TRAF1-203ENST00000546084 PRSS57Q6UWY2 283 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 SPATA12Q7Z6I5 190 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 TRGV3P03979 118 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 GNLYP22749 145 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 HSD52Q0P140 79 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 IGFL2Q6UWQ7 119 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 VKORC1Q9BQB6 163 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 ST20Q9HBF5 79 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 VWC2LB2RUY7 222 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 IFI27P40305 119 aaPredicted RBP7.76□□□□□ -1.17
TRAF1-203ENST00000546084 CACNG7P62955 275 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 HIST1H1AQ02539 215 aaPredicted RBP7.76□□□□□ -1.17
TRAF1-203ENST00000546084 GUSBP1Q15486 140 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 FAM231DQ6ZW35 169 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 PRELID3AQ96N28 172 aa7.76□□□□□ -1.17
TRAF1-203ENST00000546084 TSSC4Q9Y5U2 329 aaPredicted RBP7.76□□□□□ -1.17
TRAF1-203ENST00000546084 ANKRD17O75179 2603 aaKnown RBP7.76□□□□□ -1.17
TRAF1-203ENST00000546084 GCSHP23434 173 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 POU2AF1Q16633 256 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 ANXA2RQ3ZCQ2 193 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 ATP5L2Q7Z4Y8 100 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 TMEM160Q9NX00 188 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 CGB3P0DN86 165 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 CGB7P0DN87 165 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 NUP37Q8NFH4 326 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 SOX21Q9Y651 276 aaPredicted RBP7.75□□□□□ -1.17
TRAF1-203ENST00000546084 GAGE5Q13069 117 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 GAGE6Q13070 117 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 CCDC144NLQ6NUI1 221 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 WIPF2Q8TF74 440 aaPredicted RBP7.75□□□□□ -1.17
TRAF1-203ENST00000546084 GTSF1Q8WW33 167 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 MSRB1Q9NZV6 116 aa7.75□□□□□ -1.17
TRAF1-203ENST00000546084 C5orf64Q2M2E5 130 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 TMEM78Q5T7P6 136 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 IGFL3Q6UXB1 125 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 C1RLQ9NZP8 487 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 GATA1P15976 413 aaPredicted RBP7.74□□□□□ -1.17
TRAF1-203ENST00000546084 SAA4P35542 130 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 KLRB1Q12918 225 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 CR1LQ2VPA4 569 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 TEX36Q5VZQ5 186 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 VGLL1Q99990 258 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 IGLC1P0CG04 106 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 RPL7P18124 248 aaKnown RBP7.74□□□□□ -1.17
TRAF1-203ENST00000546084 KLF5Q13887 457 aaPredicted RBP7.74□□□□□ -1.17
TRAF1-203ENST00000546084 BVES-AS1Q5T3Y7 98 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 MBD6Q96DN6 1003 aa7.74□□□□□ -1.17
TRAF1-203ENST00000546084 CRYBG3Q68DQ2 2970 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 IGHV3OR16-12A0A075B7B8 117 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 LINC01548A6NM66 108 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 IGKV1-17P01599 117 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 CHCHD1Q96BP2 118 aaKnown RBP7.73□□□□□ -1.17
TRAF1-203ENST00000546084 FMC1Q96HJ9 113 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 C7orf69Q9H7B7 122 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 H3BUT2 72 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 FABP2P12104 132 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 JKAMPQ9P055 326 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 FCN3O75636 299 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 PSG9Q00887 426 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 ZNF502Q8TBZ5 544 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 LINC00477Q96M19 166 aa7.73□□□□□ -1.17
TRAF1-203ENST00000546084 TTTY13Q9BZ97 58 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms