RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 M6PRP20645 277 aa15.87■□□□□ 0.13
CHD4-214ENST00000545942 DAZ2Q13117 558 aaKnown RBP15.87■□□□□ 0.13
CHD4-214ENST00000545942 MIR17HGQ75NE6 70 aa15.87■□□□□ 0.13
CHD4-214ENST00000545942 GNPNAT1Q96EK6 184 aaPredicted RBP15.87■□□□□ 0.13
CHD4-214ENST00000545942 FAM167A-AS1Q96KT0 104 aa15.87■□□□□ 0.13
CHD4-214ENST00000545942 FAM19A4Q96LR4 140 aa15.87■□□□□ 0.13
CHD4-214ENST00000545942 WDR61Q9GZS3 305 aaKnown RBP15.87■□□□□ 0.13
CHD4-214ENST00000545942 AGPAT4-IT1Q9H0P7 198 aa15.87■□□□□ 0.13
CHD4-214ENST00000545942 PTTG2Q9NZH5 202 aa15.87■□□□□ 0.13
CHD4-214ENST00000545942 LINC00588Q9Y4M8 146 aa15.87■□□□□ 0.13
CHD4-214ENST00000545942 TRAV26-1A0A087WT03 109 aa15.86■□□□□ 0.13
CHD4-214ENST00000545942 NBDYA0A0U1RRE5 68 aa15.86■□□□□ 0.13
CHD4-214ENST00000545942 A6NHS1 94 aa15.86■□□□□ 0.13
CHD4-214ENST00000545942 ICAM4Q14773 271 aa15.86■□□□□ 0.13
CHD4-214ENST00000545942 MRPL32Q9BYC8 188 aaKnown RBP15.86■□□□□ 0.13
CHD4-214ENST00000545942 OR51M1Q9H341 326 aa15.86■□□□□ 0.13
CHD4-214ENST00000545942 ZNF324O75467 553 aaPredicted RBP15.85■□□□□ 0.13
CHD4-214ENST00000545942 NBEAP1P0C6P0 100 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 MED14OSP0DP75 135 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 H2BFSP57053 126 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 C9orf47Q6ZRZ4 202 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 ZNF680Q8NEM1 530 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 PPP1R1CQ8WVI7 109 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 ZNF503Q96F45 646 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 LINC00467Q9BRT7 94 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 MARVELD1Q9BSK0 173 aa15.85■□□□□ 0.13
CHD4-214ENST00000545942 C17orf112F2Z3M2 114 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 CRISP2P16562 243 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 HOXA5P20719 270 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 CD300CQ08708 224 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 BTN1A1Q13410 526 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 TMEM78Q5T7P6 136 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 FAM122CQ6P4D5 195 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 SSX7Q7RTT5 188 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 RXFP4Q8TDU9 374 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 KRTAP17-1Q9BYP8 105 aa15.84■□□□□ 0.13
CHD4-214ENST00000545942 IGKV2-40A0A087WW87 121 aaPredicted RBP15.83■□□□□ 0.12
CHD4-214ENST00000545942 A0A0J9YY99 117 aa15.83■□□□□ 0.12
CHD4-214ENST00000545942 IGKV2D-40P01614 121 aaPredicted RBP15.83■□□□□ 0.12
CHD4-214ENST00000545942 GPX1P07203 203 aa15.83■□□□□ 0.12
CHD4-214ENST00000545942 NMBP08949 121 aa15.83■□□□□ 0.12
CHD4-214ENST00000545942 RNASE4P34096 147 aaKnown RBP15.83■□□□□ 0.12
CHD4-214ENST00000545942 Q6ZTI0 123 aa15.83■□□□□ 0.12
CHD4-214ENST00000545942 PAXXQ9BUH6 204 aa15.83■□□□□ 0.12
CHD4-214ENST00000545942 GSN-AS1Q9NRJ2 163 aa15.83■□□□□ 0.12
CHD4-214ENST00000545942 FUT9Q9Y231 359 aa15.83■□□□□ 0.12
CHD4-214ENST00000545942 PET100P0DJ07 73 aa15.82■□□□□ 0.12
CHD4-214ENST00000545942 ANXA2RQ3ZCQ2 193 aa15.82■□□□□ 0.12
CHD4-214ENST00000545942 EIF4E3Q8N5X7 224 aaKnown RBP15.82■□□□□ 0.12
CHD4-214ENST00000545942 C11orf72Q8NBR9 251 aa15.82■□□□□ 0.12
CHD4-214ENST00000545942 FXYD5Q96DB9 178 aa15.82■□□□□ 0.12
CHD4-214ENST00000545942 ATP5SQ99766 215 aa15.82■□□□□ 0.12
CHD4-214ENST00000545942 TMPRSS5Q9H3S3 457 aa15.82■□□□□ 0.12
CHD4-214ENST00000545942 H3BNG1 76 aa15.81■□□□□ 0.12
CHD4-214ENST00000545942 SSNA1O43805 119 aa15.81■□□□□ 0.12
CHD4-214ENST00000545942 OR10J4P0C629 311 aa15.81■□□□□ 0.12
CHD4-214ENST00000545942 DEFA1P59665 94 aa15.81■□□□□ 0.12
CHD4-214ENST00000545942 DEFA3P59666 94 aa15.81■□□□□ 0.12
CHD4-214ENST00000545942 VGLL1Q99990 258 aa15.81■□□□□ 0.12
CHD4-214ENST00000545942 PKD1P98161 4303 aa15.81■□□□□ 0.12
CHD4-214ENST00000545942 TRGV2A0A075B6R0 118 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 OR7C2O60412 319 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 MPC2O95563 127 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 C6orf223Q8N319 242 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 ZFAND2AQ8N6M9 145 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 C18orf15Q96N68 181 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 ZNF492Q9P255 531 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 HSPB11Q9Y547 144 aa15.8■□□□□ 0.12
CHD4-214ENST00000545942 DNAH11Q96DT5 4516 aa15.79■□□□□ 0.12
CHD4-214ENST00000545942 PHYHIPLQ96FC7 376 aa15.79■□□□□ 0.12
CHD4-214ENST00000545942 IBA57Q5T440 356 aaKnown RBP15.78■□□□□ 0.12
CHD4-214ENST00000545942 Q9H8V8 135 aa15.78■□□□□ 0.12
CHD4-214ENST00000545942 DYNC1H1Q14204 4646 aaKnown RBP15.78■□□□□ 0.12
CHD4-214ENST00000545942 TRGV1A0A0A0MS02 117 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 RGS13O14921 159 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 IFNA5P01569 189 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 CSN1S1P47710 185 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 ZNF138P52744 262 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 TCL1AP56279 114 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 FFAR4Q5NUL3 377 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 PRR9Q5T870 116 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 LYPD1Q8N2G4 141 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 KLF12Q9Y4X4 402 aa15.77■□□□□ 0.12
CHD4-214ENST00000545942 TRBV7-9A0A0J9YWB2 115 aa15.76■□□□□ 0.11
CHD4-214ENST00000545942 RPL12P30050 165 aaKnown RBP15.76■□□□□ 0.11
CHD4-214ENST00000545942 RANP62826 216 aaKnown RBP15.76■□□□□ 0.11
CHD4-214ENST00000545942 UBE2L3P68036 154 aaKnown RBP15.76■□□□□ 0.11
CHD4-214ENST00000545942 TNP2Q05952 138 aa15.76■□□□□ 0.11
CHD4-214ENST00000545942 SCGB1C1Q8TD33 95 aa15.76■□□□□ 0.11
CHD4-214ENST00000545942 IGHV1OR15-1A0A075B7D0 117 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 RBAKDNA6NC62 111 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 SPINK4O60575 86 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 ESRGQ1W209 222 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 KHDC3LQ587J8 217 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 TTC32Q5I0X7 151 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 ZNF575Q86XF7 245 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 Q8TAT8 98 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 UPK3BQ9BT76 320 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 SMIM3Q9BZL3 60 aa15.75■□□□□ 0.11
CHD4-214ENST00000545942 TAS2R45P59539 299 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms