RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 DEFB131AP59861 70 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 SS18Q15532 418 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 SNHG12Q9BXW3 62 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 TRBV20-1A0A075B6N2 111 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 A0A1B0GUS0 222 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 STPG4Q8N801 248 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 IGLC7A0M8Q6 106 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 C9orf118A6NHY6 69 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 PAX4O43316 350 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 SIGLEC8Q9NYZ4 499 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 K7EN84 100 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 COA6Q5JTJ3 125 aaKnown RBP9.94□□□□□ -0.82
COL4A6-209ENST00000545689 ZNF491Q8N8L2 437 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 PLXND1Q9Y4D7 1925 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 FGF23Q9GZV9 251 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-209ENST00000545689 C11orf44Q8N8P7 122 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 C1orf159Q96HA4 380 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 NAA38Q9BRA0 125 aaKnown RBP9.94□□□□□ -0.82
COL4A6-209ENST00000545689 JPT2Q9H910 190 aa9.94□□□□□ -0.82
COL4A6-209ENST00000545689 SHISA9B4DS77 424 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 G3V318 75 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 GAGE1Q13065 139 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 NBL1P41271 181 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 CDKN1BP46527 198 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 SLX1AQ9BQ83 275 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 SPANXA1Q9NS26 97 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
COL4A6-209ENST00000545689 PHF3Q92576 2039 aaKnown RBP9.92□□□□□ -0.82
COL4A6-209ENST00000545689 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 ANXA2RQ3ZCQ2 193 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 ELANEP08246 267 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
COL4A6-209ENST00000545689 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 NPBQ8NG41 125 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 SPXQ9BT56 116 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 HEATR5AQ86XA9 2040 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 ADAMTSL5Q6ZMM2 481 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 PRSS57Q6UWY2 283 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 HOXB4P17483 251 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-209ENST00000545689 MCRIP2Q9BUT9 160 aaKnown RBP9.92□□□□□ -0.82
COL4A6-209ENST00000545689 CST9LQ9H4G1 147 aa9.92□□□□□ -0.82
COL4A6-209ENST00000545689 DIAPH2-AS1Q14236 149 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 C11orf68Q9H3H3 251 aaKnown RBP9.91□□□□□ -0.82
COL4A6-209ENST00000545689 ASXL3Q9C0F0 2248 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 ZDBF2Q9HCK1 2354 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 SP5Q6BEB4 398 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-209ENST00000545689 KLF2Q9Y5W3 355 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-209ENST00000545689 SELENOKQ9Y6D0 94 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 TPRP12270 2363 aaKnown RBP9.91□□□□□ -0.82
COL4A6-209ENST00000545689 IGLL1P15814 213 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 NPC2P61916 151 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 CEP290O15078 2479 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 INS-IGF2F8WCM5 200 aa9.91□□□□□ -0.82
COL4A6-209ENST00000545689 NPYP01303 97 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 UBE2E2Q96LR5 201 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 ATP6V0BQ99437 205 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 CTSZQ9UBR2 303 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 ZNF106Q9H2Y7 1883 aaKnown RBP9.9□□□□□ -0.82
COL4A6-209ENST00000545689 F8VRH5 84 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 TRBV25-1A0A075B6N4 114 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 SPINK13Q1W4C9 94 aa9.9□□□□□ -0.82
COL4A6-209ENST00000545689 IGFBPL1Q8WX77 278 aa9.9□□□□□ -0.83
COL4A6-209ENST00000545689 F8W1H4 67 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 Q5PR19 223 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 RNF223E7ERA6 249 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 K7EP34 96 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 DENND4CQ5VZ89 1909 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 DNAJC13O75165 2243 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 CACNA1DQ01668 2161 aa9.89□□□□□ -0.83
COL4A6-209ENST00000545689 C22orf46C9J442 243 aa9.88□□□□□ -0.83
COL4A6-209ENST00000545689 RHOHQ15669 191 aa9.88□□□□□ -0.83
COL4A6-209ENST00000545689 OCIAD2Q56VL3 154 aa9.88□□□□□ -0.83
COL4A6-209ENST00000545689 CEND1Q8N111 149 aa9.88□□□□□ -0.83
COL4A6-209ENST00000545689 GP9P14770 177 aa9.88□□□□□ -0.83
COL4A6-209ENST00000545689 FOXI2Q6ZQN5 318 aa9.88□□□□□ -0.83
COL4A6-209ENST00000545689 C9JAW5 83 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 AZU1P20160 251 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 KLF12Q9Y4X4 402 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 COL4A3Q01955 1670 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 INAFM2P0DMQ5 153 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 BVES-AS1Q5T3Y7 98 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 I3L2K1 104 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 NDUFS7O75251 213 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 SPTA1P02549 2419 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 TRAV8-3A0A0A6YYJ7 113 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 359.9 ms