RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 LYNX1G3V0Z9 82 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 IGKCP01834 107 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 ORM1P02763 201 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 LYNX1P0DP58 116 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 SRSF1Q07955 248 aaKnown RBP eCLIP6.79□□□□□ -1.32
TDP1-204ENST00000545686 ZNF672Q499Z4 452 aaPredicted RBP6.79□□□□□ -1.32
TDP1-204ENST00000545686 Q8N6K4 173 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 Q8N8P6 123 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 Q8NA96 180 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 SH3BGRL2Q9UJC5 107 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 BSNQ9UPA5 3926 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 PIEZO2Q9H5I5 2752 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 DPM2O94777 84 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 CTSGP08311 255 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 PRTN3P24158 256 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 HES1Q14469 280 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 SAMD5Q5TGI4 173 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 SLC50A1Q9BRV3 221 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 DMXL2Q8TDJ6 3036 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 APC2O95996 2303 aa6.79□□□□□ -1.32
TDP1-204ENST00000545686 PRB4P10163 310 aaPredicted RBP6.78□□□□□ -1.32
TDP1-204ENST00000545686 NDPQ00604 133 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 EBI3Q14213 229 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 KLK9Q2XQG4 91 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 RAB37Q96AX2 223 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 C18orf15Q96N68 181 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 TM2D2Q9BX73 214 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 KLK9Q9UKQ9 250 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 IGLV2-18A0A075B6J9 118 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 TAL2Q16559 108 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 IL17RELQ6ZVW7 336 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 TIMD4Q96H15 378 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 MSRB1Q9NZV6 116 aa6.78□□□□□ -1.32
TDP1-204ENST00000545686 EP300Q09472 2414 aaPredicted RBP6.78□□□□□ -1.32
TDP1-204ENST00000545686 MGAQ8IWI9 3026 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 PRSS1P07477 247 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 GCSHP23434 173 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 TCTAP57738 103 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 C1orf122Q6ZSJ8 110 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 DYNAPQ8N1N2 210 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 TMEM158Q8WZ71 300 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.32
TDP1-204ENST00000545686 VKORC1Q9BQB6 163 aa6.77□□□□□ -1.32
TDP1-204ENST00000545686 ARHGAP32A7KAX9 2087 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 FXYD2P54710 66 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 MINOS1Q5TGZ0 78 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 DTX2Q86UW9 622 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 PHLDA1Q8WV24 401 aaPredicted RBP6.77□□□□□ -1.33
TDP1-204ENST00000545686 FOXC2Q99958 501 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 NAA38Q9BRA0 125 aaKnown RBP6.77□□□□□ -1.33
TDP1-204ENST00000545686 HIF1ANQ9NWT6 349 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 MINOS1-NBL1R4GNA1 71 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 TPRP12270 2363 aaKnown RBP6.77□□□□□ -1.33
TDP1-204ENST00000545686 ANKRD11Q6UB99 2663 aaPredicted RBP6.77□□□□□ -1.33
TDP1-204ENST00000545686 ADGRG4Q8IZF6 3080 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 ACACAQ13085 2346 aa6.77□□□□□ -1.33
TDP1-204ENST00000545686 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 KLRD1Q13241 179 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 FBXL19-AS1Q494R0 122 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 CEND1Q8N111 149 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 FAM110DQ8TAY7 271 aaPredicted RBP6.76□□□□□ -1.33
TDP1-204ENST00000545686 ZFAND3Q9H8U3 227 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 DMXL1Q9Y485 3027 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 MAP1BP46821 2468 aaKnown RBP6.76□□□□□ -1.33
TDP1-204ENST00000545686 IGHV4-4A0A075B6R2 117 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 NCBP2LA6PVI3 153 aaKnown RBP6.76□□□□□ -1.33
TDP1-204ENST00000545686 LINC01619G3V211 115 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 BUB3O43684 328 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 RIPPLY3P57055 190 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 VMO1Q7Z5L0 202 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 ZNF502Q8TBZ5 544 aa6.76□□□□□ -1.33
TDP1-204ENST00000545686 IGHV7-81A0A0B4J1V7 117 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 A0A1W2PRD5 423 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 A0A1W2PRF3 423 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 A0A1W2PRM7 423 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 TMEM8BA6NDV4 472 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 TMEM238C9JI98 176 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 IGHV3-23P01764 117 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 PLNP26678 52 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 LAGE3Q14657 143 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 ZC2HC1BQ5TFG8 222 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 NRACQ8N912 160 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 AGRNO00468 2067 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 GOSR1O95249 250 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 TMEM11P17152 192 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 ERCC8Q13216 396 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 TM4SF20Q53R12 229 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 MYOZ3Q8TDC0 251 aa6.75□□□□□ -1.33
TDP1-204ENST00000545686 A0A087WX48 190 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 PRAC2D3DTV9 90 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms