RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 OR51M1Q9H341 326 aa13.92□□□□□ -0.18
CHD4-213ENST00000545584 HECTD4Q9Y4D8 3996 aa13.92□□□□□ -0.18
CHD4-213ENST00000545584 H0YIZ8 118 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 SSNA1O43805 119 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 NBEAP1P0C6P0 100 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 PET100P0DJ07 73 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 M6PRP20645 277 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 ZNF680Q8NEM1 530 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 PPP1R1CQ8WVI7 109 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 MARVELD1Q9BSK0 173 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 AGPAT4-IT1Q9H0P7 198 aa13.91□□□□□ -0.18
CHD4-213ENST00000545584 TRAV26-1A0A087WT03 109 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 KLLNB2CW77 178 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 DAZ2Q13117 558 aaKnown RBP13.9□□□□□ -0.18
CHD4-213ENST00000545584 TMEM78Q5T7P6 136 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 FAM122CQ6P4D5 195 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 C9orf47Q6ZRZ4 202 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 ZNRF2Q8NHG8 242 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 FAM167A-AS1Q96KT0 104 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 PAXXQ9BUH6 204 aa13.9□□□□□ -0.18
CHD4-213ENST00000545584 GPX1P07203 203 aa13.89□□□□□ -0.19
CHD4-213ENST00000545584 RNASE4P34096 147 aaKnown RBP13.89□□□□□ -0.19
CHD4-213ENST00000545584 H2BFSP57053 126 aa13.89□□□□□ -0.19
CHD4-213ENST00000545584 ATP5SQ99766 215 aa13.89□□□□□ -0.19
CHD4-213ENST00000545584 FUT9Q9Y231 359 aa13.89□□□□□ -0.19
CHD4-213ENST00000545584 LINC00588Q9Y4M8 146 aa13.89□□□□□ -0.19
CHD4-213ENST00000545584 IGKV2-40A0A087WW87 121 aaPredicted RBP13.88□□□□□ -0.19
CHD4-213ENST00000545584 NBDYA0A0U1RRE5 68 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 IGKV2D-40P01614 121 aaPredicted RBP13.88□□□□□ -0.19
CHD4-213ENST00000545584 NMBP08949 121 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 OR10J4P0C629 311 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 CD300CQ08708 224 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 BTN1A1Q13410 526 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 SSX7Q7RTT5 188 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 EIF4E3Q8N5X7 224 aaKnown RBP13.88□□□□□ -0.19
CHD4-213ENST00000545584 RXFP4Q8TDU9 374 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 ZNF503Q96F45 646 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 FAM19A4Q96LR4 140 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 BATF3Q9NR55 127 aa13.88□□□□□ -0.19
CHD4-213ENST00000545584 TRGV2A0A075B6R0 118 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 A0A0J9YY99 117 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 OR7C2O60412 319 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 ZNF324O75467 553 aaPredicted RBP13.87□□□□□ -0.19
CHD4-213ENST00000545584 IFNA5P01569 189 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 CRISP2P16562 243 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 CSN1S1P47710 185 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 Q6ZTI0 123 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 SCGB1C1Q8TD33 95 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 FXYD5Q96DB9 178 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 LINC00467Q9BRT7 94 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 GSN-AS1Q9NRJ2 163 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 HSPB11Q9Y547 144 aa13.87□□□□□ -0.19
CHD4-213ENST00000545584 H3BNG1 76 aa13.86□□□□□ -0.19
CHD4-213ENST00000545584 RGS13O14921 159 aa13.86□□□□□ -0.19
CHD4-213ENST00000545584 MPC2O95563 127 aa13.86□□□□□ -0.19
CHD4-213ENST00000545584 HOXA5P20719 270 aa13.86□□□□□ -0.19
CHD4-213ENST00000545584 ANXA2RQ3ZCQ2 193 aa13.86□□□□□ -0.19
CHD4-213ENST00000545584 VGLL1Q99990 258 aa13.86□□□□□ -0.19
CHD4-213ENST00000545584 ZNF492Q9P255 531 aa13.86□□□□□ -0.19
CHD4-213ENST00000545584 MED14OSP0DP75 135 aa13.85□□□□□ -0.19
CHD4-213ENST00000545584 RPL12P30050 165 aaKnown RBP13.85□□□□□ -0.19
CHD4-213ENST00000545584 FFAR4Q5NUL3 377 aa13.85□□□□□ -0.19
CHD4-213ENST00000545584 TMPRSS5Q9H3S3 457 aa13.85□□□□□ -0.19
CHD4-213ENST00000545584 TRGV1A0A0A0MS02 117 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 ZNF138P52744 262 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 TAS2R45P59539 299 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 RANP62826 216 aaKnown RBP13.84□□□□□ -0.19
CHD4-213ENST00000545584 UBE2L3P68036 154 aaKnown RBP13.84□□□□□ -0.19
CHD4-213ENST00000545584 LYPD1Q8N2G4 141 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 C6orf223Q8N319 242 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 ZFAND2AQ8N6M9 145 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 C11orf72Q8NBR9 251 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 PHYHIPLQ96FC7 376 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 SMIM3Q9BZL3 60 aa13.84□□□□□ -0.19
CHD4-213ENST00000545584 TRBV7-9A0A0J9YWB2 115 aa13.83□□□□□ -0.2
CHD4-213ENST00000545584 TCL1AP56279 114 aa13.83□□□□□ -0.2
CHD4-213ENST00000545584 KHDC3LQ587J8 217 aa13.83□□□□□ -0.2
CHD4-213ENST00000545584 IBA57Q5T440 356 aaKnown RBP13.83□□□□□ -0.2
CHD4-213ENST00000545584 C18orf15Q96N68 181 aa13.83□□□□□ -0.2
CHD4-213ENST00000545584 ARPC5LQ9BPX5 153 aa13.83□□□□□ -0.2
CHD4-213ENST00000545584 Q9H8V8 135 aa13.83□□□□□ -0.2
CHD4-213ENST00000545584 IGHV1OR15-1A0A075B7D0 117 aa13.82□□□□□ -0.2
CHD4-213ENST00000545584 Q9H3A6 140 aa13.82□□□□□ -0.2
CHD4-213ENST00000545584 MBD2Q9UBB5 411 aa13.82□□□□□ -0.2
CHD4-213ENST00000545584 FAT2Q9NYQ8 4349 aa13.82□□□□□ -0.2
CHD4-213ENST00000545584 DNAH2Q9P225 4427 aa13.81□□□□□ -0.2
CHD4-213ENST00000545584 RBAKDNA6NC62 111 aa13.81□□□□□ -0.2
CHD4-213ENST00000545584 TTC32Q5I0X7 151 aa13.81□□□□□ -0.2
CHD4-213ENST00000545584 Q8TAT8 98 aa13.81□□□□□ -0.2
CHD4-213ENST00000545584 KLF12Q9Y4X4 402 aa13.81□□□□□ -0.2
CHD4-213ENST00000545584 SPINK4O60575 86 aa13.8□□□□□ -0.2
CHD4-213ENST00000545584 PRR9Q5T870 116 aa13.8□□□□□ -0.2
CHD4-213ENST00000545584 DNAH17Q9UFH2 4485 aa13.8□□□□□ -0.2
CHD4-213ENST00000545584 TNP2Q05952 138 aa13.79□□□□□ -0.2
CHD4-213ENST00000545584 ESRGQ1W209 222 aa13.79□□□□□ -0.2
CHD4-213ENST00000545584 ACOT6Q3I5F7 207 aaPredicted RBP13.79□□□□□ -0.2
CHD4-213ENST00000545584 UPK3BQ9BT76 320 aa13.79□□□□□ -0.2
CHD4-213ENST00000545584 TP53TG3Q9ULZ0 132 aa13.79□□□□□ -0.2
CHD4-213ENST00000545584 A0A1W2PPV4 95 aa13.78□□□□□ -0.2
CHD4-213ENST00000545584 ZNF415Q09FC8 603 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms