RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 LINC00588Q9Y4M8 146 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 TIMM9Q9Y5J7 89 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 GAGE12BA1L429 117 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 C7orf71A4D174 169 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 SNURFLB1AK76 121 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 GAGE7O76087 117 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 GAGE12FP0CL80 117 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 GAGE12GP0CL81 117 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 GAGE12IP0CL82 117 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 HOXA5P20719 270 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 PRELID1Q9Y255 219 aa14.73□□□□□ -0.05
SCARB1-210ENST00000545493 IGKV2-40A0A087WW87 121 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-210ENST00000545493 IGKV2D-40P01614 121 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-210ENST00000545493 RLN2P04090 185 aa14.72□□□□□ -0.05
SCARB1-210ENST00000545493 SLC25A5P05141 298 aaKnown RBP14.72□□□□□ -0.05
SCARB1-210ENST00000545493 PRR9Q5T870 116 aa14.72□□□□□ -0.05
SCARB1-210ENST00000545493 C1orf134Q5TEV5 83 aa14.72□□□□□ -0.05
SCARB1-210ENST00000545493 C11orf72Q8NBR9 251 aa14.72□□□□□ -0.05
SCARB1-210ENST00000545493 AGPAT4-IT1Q9H0P7 198 aa14.72□□□□□ -0.05
SCARB1-210ENST00000545493 TRAV26-1A0A087WT03 109 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 NBDYA0A0U1RRE5 68 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 CD300CQ08708 224 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 ICAM4Q14773 271 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 SOHLH1Q5JUK2 328 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 Q6ZTI0 123 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 PPP1R1CQ8WVI7 109 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 FXYD5Q96DB9 178 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 MARVELD1Q9BSK0 173 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 MRPL32Q9BYC8 188 aaKnown RBP14.71□□□□□ -0.05
SCARB1-210ENST00000545493 KCNIP2Q9NS61 270 aa14.71□□□□□ -0.05
SCARB1-210ENST00000545493 ZNF324O75467 553 aaPredicted RBP14.7□□□□□ -0.06
SCARB1-210ENST00000545493 CRISP2P16562 243 aa14.7□□□□□ -0.06
SCARB1-210ENST00000545493 DAZ2Q13117 558 aaKnown RBP14.7□□□□□ -0.06
SCARB1-210ENST00000545493 OR5I1Q13606 314 aa14.7□□□□□ -0.06
SCARB1-210ENST00000545493 FAM122CQ6P4D5 195 aa14.7□□□□□ -0.06
SCARB1-210ENST00000545493 C9orf47Q6ZRZ4 202 aa14.7□□□□□ -0.06
SCARB1-210ENST00000545493 PHYHIPLQ96FC7 376 aa14.7□□□□□ -0.06
SCARB1-210ENST00000545493 TMPRSS5Q9H3S3 457 aa14.7□□□□□ -0.06
SCARB1-210ENST00000545493 AAMDCQ9H7C9 122 aa14.7□□□□□ -0.06
SCARB1-210ENST00000545493 M6PRP20645 277 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 CCL18P55774 89 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 ZNF680Q8NEM1 530 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 LINC00477Q96M19 166 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 ATP5SQ99766 215 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 VGLL1Q99990 258 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 LINC00467Q9BRT7 94 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 OR51M1Q9H341 326 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 FUT9Q9Y231 359 aa14.69□□□□□ -0.06
SCARB1-210ENST00000545493 A0A0J9YY99 117 aa14.68□□□□□ -0.06
SCARB1-210ENST00000545493 OR10J4P0C629 311 aa14.68□□□□□ -0.06
SCARB1-210ENST00000545493 CYCSP99999 105 aaKnown RBP14.68□□□□□ -0.06
SCARB1-210ENST00000545493 ZFAND2AQ8N6M9 145 aa14.68□□□□□ -0.06
SCARB1-210ENST00000545493 GNPNAT1Q96EK6 184 aaPredicted RBP14.68□□□□□ -0.06
SCARB1-210ENST00000545493 ZNF503Q96F45 646 aa14.68□□□□□ -0.06
SCARB1-210ENST00000545493 PAXXQ9BUH6 204 aa14.68□□□□□ -0.06
SCARB1-210ENST00000545493 GSN-AS1Q9NRJ2 163 aa14.68□□□□□ -0.06
SCARB1-210ENST00000545493 HSPB11Q9Y547 144 aa14.68□□□□□ -0.06
SCARB1-210ENST00000545493 NBEAP1P0C6P0 100 aa14.67□□□□□ -0.06
SCARB1-210ENST00000545493 Q6ZQT7 251 aa14.67□□□□□ -0.06
SCARB1-210ENST00000545493 SSX7Q7RTT5 188 aa14.67□□□□□ -0.06
SCARB1-210ENST00000545493 ZNF575Q86XF7 245 aa14.67□□□□□ -0.06
SCARB1-210ENST00000545493 EIF4E3Q8N5X7 224 aaKnown RBP14.67□□□□□ -0.06
SCARB1-210ENST00000545493 RXFP4Q8TDU9 374 aa14.67□□□□□ -0.06
SCARB1-210ENST00000545493 C17orf112F2Z3M2 114 aa14.66□□□□□ -0.06
SCARB1-210ENST00000545493 MPC2O95563 127 aa14.66□□□□□ -0.06
SCARB1-210ENST00000545493 MED14OSP0DP75 135 aa14.66□□□□□ -0.06
SCARB1-210ENST00000545493 RNASE4P34096 147 aaKnown RBP14.66□□□□□ -0.06
SCARB1-210ENST00000545493 ANXA2RQ3ZCQ2 193 aa14.66□□□□□ -0.06
SCARB1-210ENST00000545493 TMEM78Q5T7P6 136 aa14.66□□□□□ -0.06
SCARB1-210ENST00000545493 Q8TAT8 98 aa14.66□□□□□ -0.06
SCARB1-210ENST00000545493 ZNF492Q9P255 531 aa14.66□□□□□ -0.06
SCARB1-210ENST00000545493 SSNA1O43805 119 aa14.65□□□□□ -0.06
SCARB1-210ENST00000545493 C6orf223Q8N319 242 aa14.65□□□□□ -0.06
SCARB1-210ENST00000545493 C18orf15Q96N68 181 aa14.65□□□□□ -0.06
SCARB1-210ENST00000545493 OR7C2O60412 319 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 GPX1P07203 203 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 NMBP08949 121 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 TCL1AP56279 114 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 TNP2Q05952 138 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 KRTAP1-5Q9BYS1 174 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 SMIM3Q9BZL3 60 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 MBD2Q9UBB5 411 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 TP53TG3Q9ULZ0 132 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 KLF12Q9Y4X4 402 aa14.64□□□□□ -0.07
SCARB1-210ENST00000545493 TRGV1A0A0A0MS02 117 aa14.63□□□□□ -0.07
SCARB1-210ENST00000545493 H3BNG1 76 aa14.63□□□□□ -0.07
SCARB1-210ENST00000545493 SPINK4O60575 86 aa14.63□□□□□ -0.07
SCARB1-210ENST00000545493 EIF3GO75821 320 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCARB1-210ENST00000545493 PET100P0DJ07 73 aa14.63□□□□□ -0.07
SCARB1-210ENST00000545493 UBE2L3P68036 154 aaKnown RBP14.63□□□□□ -0.07
SCARB1-210ENST00000545493 FFAR4Q5NUL3 377 aa14.63□□□□□ -0.07
SCARB1-210ENST00000545493 VSIG2Q96IQ7 327 aa14.63□□□□□ -0.07
SCARB1-210ENST00000545493 DEFA1P59665 94 aa14.62□□□□□ -0.07
SCARB1-210ENST00000545493 DEFA3P59666 94 aa14.62□□□□□ -0.07
SCARB1-210ENST00000545493 IBA57Q5T440 356 aaKnown RBP14.62□□□□□ -0.07
SCARB1-210ENST00000545493 UPK3BQ9BT76 320 aa14.62□□□□□ -0.07
SCARB1-210ENST00000545493 Q9H3A6 140 aa14.62□□□□□ -0.07
SCARB1-210ENST00000545493 TRGV2A0A075B6R0 118 aa14.61□□□□□ -0.07
SCARB1-210ENST00000545493 IGHV1OR15-1A0A075B7D0 117 aa14.61□□□□□ -0.07
SCARB1-210ENST00000545493 RPL12P30050 165 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms