RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 UFC1Q9Y3C8 167 aa5.39□□□□□ -1.55
SPPL3-209ENST00000545209 SMAD5-AS1Q9Y6J3 95 aa5.39□□□□□ -1.55
SPPL3-209ENST00000545209 MYO9AB2RTY4 2548 aa5.39□□□□□ -1.55
SPPL3-209ENST00000545209 TEX15Q9BXT5 2789 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 IGHV3OR16-13A0A075B7E8 117 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 IGKV2-40A0A087WW87 121 aaPredicted RBP5.38□□□□□ -1.55
SPPL3-209ENST00000545209 IGHV3-74A0A0B4J1X5 117 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 XKRY2A2RUG3 117 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 RBAKDNA6NC62 111 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 C19orf71A6NCJ1 209 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 FAM231BA6NCW3 169 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 K7EMT4 169 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 PHOX2AO14813 284 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 IGKV2D-40P01614 121 aaPredicted RBP5.38□□□□□ -1.55
SPPL3-209ENST00000545209 HLA-DQA1P01909 254 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 APOHP02749 345 aaPredicted RBP5.38□□□□□ -1.55
SPPL3-209ENST00000545209 S100A2P29034 98 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 RAB4BP61018 213 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 LCN12Q6JVE5 192 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 UNQ9165/PRO28630Q6UXU0 137 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 IL17RELQ6ZVW7 336 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 ATP5L2Q7Z4Y8 100 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 GPHB5Q86YW7 130 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 Q8N2B8 174 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 GLMPQ8WWB7 406 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 C16orf92Q96LL3 132 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 CLUHP3Q96NS8 147 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 GNB1LQ9BYB4 327 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 GFRA4Q9GZZ7 299 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 YAE1D1Q9NRH1 226 aa5.38□□□□□ -1.55
SPPL3-209ENST00000545209 ITPR2Q14571 2701 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 IGHV7-4-1A0A0J9YVY3 117 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 HIGD1CA8MV81 97 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 SNURFLB1AK76 121 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 CA1P00915 261 aaPredicted RBP5.37□□□□□ -1.55
SPPL3-209ENST00000545209 LGALS1P09382 135 aaKnown RBP5.37□□□□□ -1.55
SPPL3-209ENST00000545209 CBLN1P23435 193 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 CDX1P47902 265 aaPredicted RBP5.37□□□□□ -1.55
SPPL3-209ENST00000545209 FAM162BQ5T6X4 162 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 Q6AWC8 147 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 MRPL54Q6P161 138 aaKnown RBP5.37□□□□□ -1.55
SPPL3-209ENST00000545209 RBPMS2Q6ZRY4 209 aaKnown RBP5.37□□□□□ -1.55
SPPL3-209ENST00000545209 RNF152Q8N8N0 203 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 OR2D3Q8NGH3 330 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 WIPF2Q8TF74 440 aaPredicted RBP5.37□□□□□ -1.55
SPPL3-209ENST00000545209 ZC2HC1AQ96GY0 325 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 UBE2E2Q96LR5 201 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 NEU1Q99519 415 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 HECTD1Q9ULT8 2610 aa5.37□□□□□ -1.55
SPPL3-209ENST00000545209 DNAJC9-AS1A6NH13 148 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 ZNF705FA8MVS1 300 aaPredicted RBP5.36□□□□□ -1.55
SPPL3-209ENST00000545209 SPINK4O60575 86 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 RPS20P60866 119 aaKnown RBP5.36□□□□□ -1.55
SPPL3-209ENST00000545209 SMUG1Q53HV7 270 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 COA6Q5JTJ3 125 aaKnown RBP5.36□□□□□ -1.55
SPPL3-209ENST00000545209 TMEM78Q5T7P6 136 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 COX8CQ7Z4L0 72 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 RNF182Q8N6D2 247 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 ZNF738Q8NE65 137 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 NUP35Q8NFH5 326 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 MYOZ3Q8TDC0 251 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 BORCS7Q96B45 105 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 DUX5Q96PT3 197 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 PRR25Q96S07 402 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 VGLL1Q99990 258 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 RHPN1-AS1Q9BWJ2 59 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 NRN1Q9NPD7 142 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 SMPXQ9UHP9 88 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 SONP18583 2426 aaKnown RBP5.36□□□□□ -1.55
SPPL3-209ENST00000545209 MXRA5Q9NR99 2828 aa5.36□□□□□ -1.55
SPPL3-209ENST00000545209 FASNP49327 2511 aaKnown RBP5.35□□□□□ -1.55
SPPL3-209ENST00000545209 TRAV8-2A0A0B4J237 113 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 A0A1B0GW15 77 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 TMEM189A5PLL7 270 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 M0QZ24 198 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 LGALS9O00182 355 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 OVOL1O14753 267 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 SH2D1AO60880 128 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 APCSP02743 223 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 SMIM6P0DI80 62 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 CRISP2P16562 243 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 HLA-DMBP28068 263 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 ID1P41134 155 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 ZNF138P52744 262 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 HBBP68871 147 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 RIGQ13278 110 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 TM4SF20Q53R12 229 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 C10orf99Q6UWK7 81 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 LINC00322Q6ZN03 302 aaPredicted RBP5.35□□□□□ -1.55
SPPL3-209ENST00000545209 TMEM136Q6ZRR5 245 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 TCF24Q7RTU0 167 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 HIST3H2BBQ8N257 126 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 KLHDC1Q8N7A1 406 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 OR10J6PQ8NGY7 276 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 Q8TAT8 98 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 C8orf49Q96NF6 230 aa5.35□□□□□ -1.55
SPPL3-209ENST00000545209 NOTCH2Q04721 2471 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms