RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TRAV10A0A0B4J240 114 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 CRXO43186 299 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-224ENST00000544990 NBEAP1P0C6P0 100 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 PYYP10082 97 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 EMP1P54849 157 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 TAS2R45P59539 299 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF266Q14584 549 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 ACOT6Q3I5F7 207 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-224ENST00000544990 MIR17HGQ75NE6 70 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 TMEM256Q8N2U0 113 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 INO80EQ8NBZ0 244 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-224ENST00000544990 MRPL53Q96EL3 112 aaKnown RBP5.29□□□□□ -1.56
CPSF7-224ENST00000544990 LINC01587Q99440 93 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 C20orf144Q9BQM9 153 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 PAXXQ9BUH6 204 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 SLC25A2Q9BXI2 301 aa5.29□□□□□ -1.56
CPSF7-224ENST00000544990 CSMD3Q7Z407 3707 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 TRAV12-2A0A075B6T6 113 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 A0A1W2PPV4 95 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 IGLL5B9A064 214 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 OR7C2O60412 319 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 LY6G6CO95867 125 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 LEPP41159 167 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 PCP4P48539 62 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 OXA1LQ15070 435 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 C12orf74Q32Q52 190 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 KHDC3LQ587J8 217 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 Q6ZTC4 211 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 BAP18Q8IXM2 172 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 RPP25LQ8N5L8 163 aaKnown RBP5.28□□□□□ -1.56
CPSF7-224ENST00000544990 FAM167A-AS1Q96KT0 104 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 LINC00477Q96M19 166 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 AQP10Q96PS8 301 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 ODF3Q96PU9 254 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 WFDC1Q9HC57 220 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 CELA1Q9UNI1 258 aa5.28□□□□□ -1.56
CPSF7-224ENST00000544990 YTHDF2Q9Y5A9 579 aaKnown RBP5.28□□□□□ -1.56
CPSF7-224ENST00000544990 DEFB131BA0A096LNP1 70 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 ZNF705GA8MUZ8 300 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-224ENST00000544990 PRAC2D3DTV9 90 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 H7BYZ3 331 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 M0R3E3 92 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 NDUFB4O95168 129 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 OR10J4P0C629 311 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 PRB4P10163 310 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-224ENST00000544990 M6PRP20645 277 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 CSN1S1P47710 185 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 TAS2R60P59551 318 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 FAM222AQ5U5X8 452 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 PQLC2Q6ZP29 291 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 LYPD1Q8N2G4 141 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 EXOC3-AS1Q8N2X6 119 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 OR2T35Q8NGX2 323 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 NIPSNAP3BQ9BS92 247 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
CPSF7-224ENST00000544990 RYR3Q15413 4870 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 FXYD6-FXYD2A0A087WZ82 144 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 BORCS7-ASMTA0A0B4J1R7 106 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 LYRM9A8MSI8 78 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 MBP02144 154 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 CT45A10P0DMU9 189 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 HTN1P15515 57 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 DAD1P61803 113 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 RANP62826 216 aaKnown RBP5.26□□□□□ -1.57
CPSF7-224ENST00000544990 UBE2L3P68036 154 aaKnown RBP5.26□□□□□ -1.57
CPSF7-224ENST00000544990 SERF2P84101 59 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 Q5BKY6 102 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 FAM74A1Q5RGS3 127 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 TMEM78Q5T7P6 136 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 LGALS9CQ6DKI2 356 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 FAM122CQ6P4D5 195 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 ZNF493Q6ZR52 646 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 C9orf47Q6ZRZ4 202 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 ZNF767PQ75MW2 155 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 HSD17B11Q8NBQ5 300 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 OR10G4Q8NGN3 311 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 OR10G9Q8NGN4 311 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 OR10G7Q8NGN6 311 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 RXFP4Q8TDU9 374 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 FXYD5Q96DB9 178 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 DAZAP1Q96EP5 407 aaKnown RBP5.26□□□□□ -1.57
CPSF7-224ENST00000544990 C16orf74Q96GX8 76 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 PSMG3Q9BT73 122 aaPredicted RBP5.26□□□□□ -1.57
CPSF7-224ENST00000544990 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
CPSF7-224ENST00000544990 IGHV4-4A0A075B6R2 117 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 J3KRW8 73 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 SLC25A5P05141 298 aaKnown RBP5.25□□□□□ -1.57
CPSF7-224ENST00000544990 ATP6V0CP27449 155 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 CDC34P49427 236 aaPredicted RBP5.25□□□□□ -1.57
CPSF7-224ENST00000544990 RAB2AP61019 212 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 FOXI1Q12951 378 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 ERCC8Q13216 396 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 GFI1BQ5VTD9 330 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 OR2G3Q8NGZ4 309 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 CMTM2Q8TAZ6 248 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 TMEM263Q8WUH6 116 aaKnown RBP5.25□□□□□ -1.57
CPSF7-224ENST00000544990 GNPNAT1Q96EK6 184 aaPredicted RBP5.25□□□□□ -1.57
CPSF7-224ENST00000544990 PHYHIPLQ96FC7 376 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms