RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 CDKN1BP46527 198 aa16.13■□□□□ 0.17
BPTF-208ENST00000544778 J3QKU1 62 aa16.13■□□□□ 0.17
BPTF-208ENST00000544778 FGF6P10767 208 aa16.13■□□□□ 0.17
BPTF-208ENST00000544778 IGHV4-28A0A0C4DH34 117 aa16.12■□□□□ 0.17
BPTF-208ENST00000544778 C8orf86Q6ZUL3 223 aa16.12■□□□□ 0.17
BPTF-208ENST00000544778 SRSF8Q9BRL6 282 aaKnown RBP16.12■□□□□ 0.17
BPTF-208ENST00000544778 NOP10Q9NPE3 64 aaKnown RBP16.12■□□□□ 0.17
BPTF-208ENST00000544778 RS1O15537 224 aa16.12■□□□□ 0.17
BPTF-208ENST00000544778 A0A1W2PPI3 338 aa16.12■□□□□ 0.17
BPTF-208ENST00000544778 BUB3O43684 328 aa16.12■□□□□ 0.17
BPTF-208ENST00000544778 MST1P26927 711 aa16.12■□□□□ 0.17
BPTF-208ENST00000544778 COL6A6A6NMZ7 2263 aa16.12■□□□□ 0.17
BPTF-208ENST00000544778 PFN1P07737 140 aaKnown RBP16.11■□□□□ 0.17
BPTF-208ENST00000544778 MED12Q93074 2177 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 NDUFB8O95169 186 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 C1orf194Q5T5A4 169 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 TEX36Q5VZQ5 186 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 GFI1Q99684 422 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 SPTA1P02549 2419 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 FLVCR1-AS1Q8TAF5 88 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 C2orf66Q6UXQ4 117 aa16.11■□□□□ 0.17
BPTF-208ENST00000544778 TRAV13-2A0A0B4J235 113 aa16.1■□□□□ 0.17
BPTF-208ENST00000544778 C15orf62A8K5M9 175 aa16.1■□□□□ 0.17
BPTF-208ENST00000544778 PDE6HQ13956 83 aa16.1■□□□□ 0.17
BPTF-208ENST00000544778 IGHV1-24A0A0C4DH33 117 aa16.1■□□□□ 0.17
BPTF-208ENST00000544778 TRBV24-1A0A075B6N3 115 aa16.1■□□□□ 0.17
BPTF-208ENST00000544778 SPTBN2O15020 2390 aa16.1■□□□□ 0.17
BPTF-208ENST00000544778 ZNF503Q96F45 646 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 GFRA4Q9GZZ7 299 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 COL4A5P29400 1685 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 NMSQ5H8A3 153 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 TMEM14EPQ6UXP3 125 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 MRPL27Q9P0M9 148 aaKnown RBP16.09■□□□□ 0.17
BPTF-208ENST00000544778 IGHV2-70DA0A0C4DH43 119 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 SDHAF1A6NFY7 115 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 CFHR4Q92496 578 aa16.09■□□□□ 0.17
BPTF-208ENST00000544778 ZNF124Q15973 351 aa16.08■□□□□ 0.17
BPTF-208ENST00000544778 TICRRQ7Z2Z1 1910 aa16.08■□□□□ 0.16
BPTF-208ENST00000544778 FGF16O43320 207 aa16.08■□□□□ 0.16
BPTF-208ENST00000544778 C5orf63A6NC05 138 aa16.08■□□□□ 0.16
BPTF-208ENST00000544778 HELZP42694 1942 aaKnown RBP16.07■□□□□ 0.16
BPTF-208ENST00000544778 C4orf48Q5BLP8 95 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 ZNF362Q5T0B9 420 aaPredicted RBP16.07■□□□□ 0.16
BPTF-208ENST00000544778 WNK2Q9Y3S1 2297 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 CACNA1GO43497 2377 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 SHISA9B4DS77 424 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 PRSS46E5RG02 174 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 NDUFA12Q9UI09 145 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 LYPD3O95274 346 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 UBE2V1Q13404 147 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 ZNF581Q9P0T4 197 aa16.07■□□□□ 0.16
BPTF-208ENST00000544778 Q8N8P6 123 aa16.06■□□□□ 0.16
BPTF-208ENST00000544778 RBM3P98179 157 aaKnown RBP16.06■□□□□ 0.16
BPTF-208ENST00000544778 UTF1Q5T230 341 aa16.06■□□□□ 0.16
BPTF-208ENST00000544778 J3QRE1 110 aa16.06■□□□□ 0.16
BPTF-208ENST00000544778 TIRAPP58753 221 aa16.06■□□□□ 0.16
BPTF-208ENST00000544778 ZNF134P52741 427 aa16.05■□□□□ 0.16
BPTF-208ENST00000544778 HERVK_113P63121 156 aa16.05■□□□□ 0.16
BPTF-208ENST00000544778 BAALCQ8WXS3 180 aa16.05■□□□□ 0.16
BPTF-208ENST00000544778 TRAV1-1A0A0B4J248 108 aa16.05■□□□□ 0.16
BPTF-208ENST00000544778 LY96Q9Y6Y9 160 aa16.05■□□□□ 0.16
BPTF-208ENST00000544778 EP300Q09472 2414 aaPredicted RBP16.05■□□□□ 0.16
BPTF-208ENST00000544778 ETDCA0A1B0GVM5 59 aa16.05■□□□□ 0.16
BPTF-208ENST00000544778 IFITM1P13164 125 aa16.05■□□□□ 0.16
BPTF-208ENST00000544778 PNRC2Q9NPJ4 139 aaKnown RBP16.05■□□□□ 0.16
BPTF-208ENST00000544778 A0A1B0GUS0 222 aa16.04■□□□□ 0.16
BPTF-208ENST00000544778 TSSC4Q9Y5U2 329 aaPredicted RBP16.04■□□□□ 0.16
BPTF-208ENST00000544778 TRBV20-1A0A075B6N2 111 aa16.04■□□□□ 0.16
BPTF-208ENST00000544778 MAJINQ3KP22 176 aa16.04■□□□□ 0.16
BPTF-208ENST00000544778 MRPL51Q4U2R6 128 aaKnown RBP16.04■□□□□ 0.16
BPTF-208ENST00000544778 THSD7AQ9UPZ6 1657 aa16.04■□□□□ 0.16
BPTF-208ENST00000544778 FAM231BA6NCW3 169 aa16.04■□□□□ 0.16
BPTF-208ENST00000544778 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.04■□□□□ 0.16
BPTF-208ENST00000544778 DLEU1O43261 78 aa16.03■□□□□ 0.16
BPTF-208ENST00000544778 CARD19Q96LW7 228 aa16.03■□□□□ 0.16
BPTF-208ENST00000544778 NDUFA4O00483 81 aa16.03■□□□□ 0.16
BPTF-208ENST00000544778 Q6ZS92 163 aa16.03■□□□□ 0.16
BPTF-208ENST00000544778 C1orf43Q9BWL3 253 aa16.03■□□□□ 0.16
BPTF-208ENST00000544778 K7ENP7 123 aa16.02■□□□□ 0.16
BPTF-208ENST00000544778 FAM120AOSQ5T036 256 aa16.02■□□□□ 0.16
BPTF-208ENST00000544778 COLCA2A8K830 154 aa16.02■□□□□ 0.16
BPTF-208ENST00000544778 A0A1B0GW64 132 aa16.02■□□□□ 0.15
BPTF-208ENST00000544778 CYTL1Q9NRR1 136 aa16.02■□□□□ 0.15
BPTF-208ENST00000544778 EML6Q6ZMW3 1958 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 J3QLI3 93 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 CCL24O00175 119 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 SLAQ13239 276 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 LHFPL1Q86WI0 220 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 PKIGQ9Y2B9 76 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 TMEM258P61165 79 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 RNF144BQ7Z419 303 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 NRXN2Q9P2S2 1712 aa16.01■□□□□ 0.15
BPTF-208ENST00000544778 FAM104BQ5XKR9 115 aa16■□□□□ 0.15
BPTF-208ENST00000544778 TRIOBPQ9H2D6 2365 aa16■□□□□ 0.15
BPTF-208ENST00000544778 FNDC10F2Z333 226 aa16■□□□□ 0.15
BPTF-208ENST00000544778 WFDC9Q8NEX5 89 aa16■□□□□ 0.15
BPTF-208ENST00000544778 IGHV3-30P01768 117 aa16■□□□□ 0.15
BPTF-208ENST00000544778 IGHV3-33P01772 117 aa16■□□□□ 0.15
BPTF-208ENST00000544778 IGHV3-30-3P0DP02 117 aa16■□□□□ 0.15
BPTF-208ENST00000544778 IGHV3-30-5P0DP03 117 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms