RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-224ENST00000544513 FAM24AA6NFZ4 105 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 HIST1H1EP10412 219 aaKnown RBP9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 CRISP2P16562 243 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 BCAP31P51572 246 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 CD300CQ08708 224 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 ERCC8Q13216 396 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 IL15RAQ13261 267 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 PDE6HQ13956 83 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 C12orf45Q8N5I9 185 aaPredicted RBP9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 LINC00477Q96M19 166 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 PRELID1Q9Y255 219 aa9.52□□□□□ -0.89
SEMA4D-224ENST00000544513 TRGV2A0A075B6R0 118 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 SPINK4O60575 86 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 NMBP08949 121 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 S100A11P31949 105 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 SULT1A1P50225 295 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 LINC00315P59091 139 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 EIF4E3Q8N5X7 224 aaKnown RBP9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 C2orf50Q96LR7 162 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 FUT9Q9Y231 359 aa9.51□□□□□ -0.89
SEMA4D-224ENST00000544513 SRRM2Q9UQ35 2752 aaKnown RBP9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 TRGV1A0A0A0MS02 117 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 UBE2L5PA0A1B0GUS4 154 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 IGSF23A1L1A6 192 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 FAM25EA8MYX2 175 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 LYRM1O43325 122 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 TCRBP04435 133 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 RNASE4P34096 147 aaKnown RBP9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 TCL1AP56279 114 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 BTN1A1Q13410 526 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 KLF12Q9Y4X4 402 aa9.5□□□□□ -0.89
SEMA4D-224ENST00000544513 MYCBP2O75592 4640 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 C5orf51A6NDU8 294 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 SIVA1O15304 175 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 MPDU1O75352 247 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 PYYP10082 97 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 PVALBP20472 110 aaPredicted RBP9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 IBA57Q5T440 356 aaKnown RBP9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 EXOC3-AS1Q8N2X6 119 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 ZFAND2AQ8N6M9 145 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 ST6GAL2Q96JF0 529 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 SEC22CQ9BRL7 303 aa9.49□□□□□ -0.89
SEMA4D-224ENST00000544513 TRAV6A0A075B6T7 132 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 HBG1P69891 147 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 HBG2P69892 147 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 BAXQ07812 192 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 ATP6V1FQ16864 119 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 GCSAMLQ5JQS6 135 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 PRR9Q5T870 116 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 STX12Q86Y82 276 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 VGLL1Q99990 258 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 NUDT15Q9NV35 164 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 TP53TG3Q9ULZ0 132 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 TIMM9Q9Y5J7 89 aa9.48□□□□□ -0.89
SEMA4D-224ENST00000544513 PAX4O43316 350 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 NXPH4O95158 308 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 GPX1P07203 203 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 FGF7P21781 194 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 RAB32Q13637 225 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 Q6ZQT7 251 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 CCDC32Q9BV29 185 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 NPCDR1Q9BY65 106 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 ICOSQ9Y6W8 199 aa9.47□□□□□ -0.89
SEMA4D-224ENST00000544513 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 IGKV2-40A0A087WW87 121 aaPredicted RBP9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 TRBV7-9A0A0J9YWB2 115 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 IGKV2D-40P01614 121 aaPredicted RBP9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 S100A10P60903 97 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 FHL2Q14192 279 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 ICAM4Q14773 271 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 AAMDCQ9H7C9 122 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 ZNF492Q9P255 531 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 PRO0255Q9UI72 69 aa9.46□□□□□ -0.9
SEMA4D-224ENST00000544513 CRYBA4P53673 196 aa9.45□□□□□ -0.9
SEMA4D-224ENST00000544513 SLAQ13239 276 aa9.45□□□□□ -0.9
SEMA4D-224ENST00000544513 TMEM78Q5T7P6 136 aa9.45□□□□□ -0.9
SEMA4D-224ENST00000544513 CDPF1Q6NVV7 123 aa9.45□□□□□ -0.9
SEMA4D-224ENST00000544513 LYPD5Q6UWN5 251 aa9.45□□□□□ -0.9
SEMA4D-224ENST00000544513 MRPL16Q9NX20 251 aaKnown RBP9.45□□□□□ -0.9
SEMA4D-224ENST00000544513 HHLA3Q9XRX5 114 aa9.45□□□□□ -0.9
SEMA4D-224ENST00000544513 RGS13O14921 159 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 IGHV3-53P01767 116 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 H2AFB2P0C5Z0 115 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 FAM122CQ6P4D5 195 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 GPN1Q9HCN4 374 aaPredicted RBP9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 TNFRSF18Q9Y5U5 241 aa9.44□□□□□ -0.9
SEMA4D-224ENST00000544513 ZNF138P52744 262 aa9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 XGP55808 180 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms