RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 APC2O95996 2303 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 CACNA1BQ00975 2339 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 CDKN1BP46527 198 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 NCOR1O75376 2440 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 ATP6V0E1O15342 81 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 CRIPAKQ8N1N5 446 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 K7ERJ3 54 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 GATA3P23771 443 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 TIRAPP58753 221 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 YPEL3P61236 119 aaPredicted RBP8.35□□□□□ -1.07
PCDH9-204ENST00000544246 POU2AF1Q16633 256 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 ABCA7Q8IZY2 2146 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 CNOT1A5YKK6 2376 aaKnown RBP8.35□□□□□ -1.07
PCDH9-204ENST00000544246 IGHV4-4A0A075B6R2 117 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 COL8A2P25067 703 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 REG4Q9BYZ8 158 aa8.35□□□□□ -1.07
PCDH9-204ENST00000544246 TRAV12-2A0A075B6T6 113 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 LYPD3O95274 346 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 Q6P435 159 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 H3BMG7 143 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 ZNF134P52741 427 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 ZNF503Q96F45 646 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 UNC13CQ8NB66 2214 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 LYPD2Q6UXB3 125 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 A0A0G2JNJ9 132 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 PSMB8P28062 276 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 XCL1P47992 114 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 MLANAQ16655 118 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
PCDH9-204ENST00000544246 Q9UFV3 132 aa8.34□□□□□ -1.07
PCDH9-204ENST00000544246 SIVA1O15304 175 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 GGNQ86UU5 652 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 BPESC1Q9GZL8 116 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 TRBV19A0A075B6N1 114 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 PROP1O75360 226 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 IGKV1D-17A0A075B6S4 117 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 H3BQ85 93 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 IGLV3-19P01714 112 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 HERV-K104P63124 156 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 RHOHQ15669 191 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 TDRD6O60522 2096 aaKnown RBP8.33□□□□□ -1.08
PCDH9-204ENST00000544246 B5MCH6 92 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 F8VRH5 84 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 RNF223E7ERA6 249 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 MSMBP08118 114 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 CD59P13987 128 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 UBE2E1P51965 193 aa8.33□□□□□ -1.08
PCDH9-204ENST00000544246 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
PCDH9-204ENST00000544246 NDUFA4O00483 81 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 CFC1BP0CG36 223 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 CFC1P0CG37 223 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 C12orf74Q32Q52 190 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 VSIG2Q96IQ7 327 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 BUB3O43684 328 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 SPATA25Q9BR10 227 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 SIGLEC8Q9NYZ4 499 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 C20orf78Q9BR46 151 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 NPYP01303 97 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 LYL1P12980 280 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 PYGO2Q9BRQ0 406 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 EFNA2O43921 213 aa8.32□□□□□ -1.08
PCDH9-204ENST00000544246 THADAQ6YHU6 1953 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 J3KT08 172 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 ATOX1O00244 68 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 DYNAPQ8N1N2 210 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 FAM186AA6NE01 2351 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 NPSP0C0P6 89 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 CSRP3P50461 194 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 SPTA1P02549 2419 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 IGHV1-69DA0A0B4J2H0 117 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 IGHV1-69P01742 117 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 NREPQ16612 68 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 Q6ZQT7 251 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 C9orf47Q6ZRZ4 202 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 H3BRN7 92 aa8.31□□□□□ -1.08
PCDH9-204ENST00000544246 A0A1B0GUS0 222 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 LINC00205P59089 165 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 Q9H8V8 135 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 IGKV1-16P04430 117 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 ZFP36L1Q07352 338 aaKnown RBP8.3□□□□□ -1.08
PCDH9-204ENST00000544246 TEX36Q5VZQ5 186 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 COX7B2Q8TF08 81 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 Q9HAA7 133 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 A0A0J9YY99 117 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 IGFBPL1Q8WX77 278 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 PRR25Q96S07 402 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 Q6ZS49 121 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 MRPL53Q96EL3 112 aaKnown RBP8.3□□□□□ -1.08
PCDH9-204ENST00000544246 TMEM14CQ9P0S9 112 aa8.3□□□□□ -1.08
PCDH9-204ENST00000544246 IGLL1P15814 213 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 MRPL36Q9P0J6 103 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms