RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 WFDC2Q14508 124 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 SRSF8Q9BRL6 282 aaKnown RBP18.48■□□□□ 0.55
SHD-201ENST00000543264 RAB1BQ9H0U4 201 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 CUL9Q8IWT3 2517 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 IGHV3-23P01764 117 aa18.47■□□□□ 0.55
SHD-201ENST00000543264 COX8CQ7Z4L0 72 aa18.47■□□□□ 0.55
SHD-201ENST00000543264 SIGMAR1Q99720 223 aa18.47■□□□□ 0.55
SHD-201ENST00000543264 NXT2Q9NPJ8 142 aaKnown RBP18.47■□□□□ 0.55
SHD-201ENST00000543264 VSTM5A8MXK1 200 aa18.47■□□□□ 0.55
SHD-201ENST00000543264 SHISA9B4DS77 424 aa18.47■□□□□ 0.55
SHD-201ENST00000543264 DPM2O94777 84 aa18.47■□□□□ 0.55
SHD-201ENST00000543264 A0A0G2JNJ9 132 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 PSMG4Q5JS54 123 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 Q9UFV3 132 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 DMXL1Q9Y485 3027 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 TRAV40A0A0B4J280 105 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 MFAP4P55083 255 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 FAM57AQ8TBR7 257 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 SH3BGRL2Q9UJC5 107 aa18.46■□□□□ 0.55
SHD-201ENST00000543264 TSSC4Q9Y5U2 329 aaPredicted RBP18.46■□□□□ 0.55
SHD-201ENST00000543264 RNF5Q99942 180 aa18.45■□□□□ 0.54
SHD-201ENST00000543264 TM2D2Q9BX73 214 aa18.45■□□□□ 0.54
SHD-201ENST00000543264 AGRNO00468 2067 aa18.45■□□□□ 0.54
SHD-201ENST00000543264 DEFB124Q8NES8 71 aa18.45■□□□□ 0.54
SHD-201ENST00000543264 EP300Q09472 2414 aaPredicted RBP18.44■□□□□ 0.54
SHD-201ENST00000543264 LINC01546A6NGU7 62 aa18.44■□□□□ 0.54
SHD-201ENST00000543264 FTH1P19P0C7X4 201 aa18.44■□□□□ 0.54
SHD-201ENST00000543264 RPL7P18124 248 aaKnown RBP18.44■□□□□ 0.54
SHD-201ENST00000543264 IGHV3OR16-8A0A075B7F1 116 aa18.44■□□□□ 0.54
SHD-201ENST00000543264 IGLL5B9A064 214 aa18.44■□□□□ 0.54
SHD-201ENST00000543264 MAPKAPK5-AS1Q8N8E1 139 aa18.44■□□□□ 0.54
SHD-201ENST00000543264 E9PLD3 99 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 NBR2O15453 112 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 Q6ZS92 163 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 FANCD2OSQ96PS1 177 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 FABP5P3A8MUU1 101 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 ERCC8Q13216 396 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 FOXI2Q6ZQN5 318 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 SMAD5-AS1Q9Y6J3 95 aa18.43■□□□□ 0.54
SHD-201ENST00000543264 H3BMG7 143 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 LY6LH3BQJ8 138 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 ATP5LO75964 103 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 IGHG4P01861 327 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 SPANXB1Q9NS25 103 aaPredicted RBP18.42■□□□□ 0.54
SHD-201ENST00000543264 MRPL35Q9NZE8 188 aaKnown RBP18.42■□□□□ 0.54
SHD-201ENST00000543264 GAGE12HA6NDE8 117 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 E7EQL1 145 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 CD300EQ496F6 205 aaPredicted RBP18.42■□□□□ 0.54
SHD-201ENST00000543264 SH2D6Q7Z4S9 175 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 DTX2Q86UW9 622 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 ZNF479Q96JC4 524 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 ONECUT1Q9UBC0 465 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 SMPXQ9UHP9 88 aa18.42■□□□□ 0.54
SHD-201ENST00000543264 F8W1H4 67 aa18.41■□□□□ 0.54
SHD-201ENST00000543264 F8W735 103 aaPredicted RBP18.41■□□□□ 0.54
SHD-201ENST00000543264 IGFL3Q6UXB1 125 aa18.41■□□□□ 0.54
SHD-201ENST00000543264 WNK2Q9Y3S1 2297 aa18.41■□□□□ 0.54
SHD-201ENST00000543264 HES1Q14469 280 aa18.41■□□□□ 0.54
SHD-201ENST00000543264 IGHV3-35A0A0C4DH35 117 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 C21orf62Q9NYP8 219 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 ARHGAP32A7KAX9 2087 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 ETDBQ3ZM63 59 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 AMTNQ6UX39 209 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 MTURNQ8N3F0 131 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 Q8N8P6 123 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 CNFNQ9BYD5 112 aa18.4■□□□□ 0.54
SHD-201ENST00000543264 IGLV11-55A0A075B6I3 123 aa18.39■□□□□ 0.54
SHD-201ENST00000543264 C12orf74Q32Q52 190 aa18.39■□□□□ 0.54
SHD-201ENST00000543264 ARPC1AQ92747 370 aa18.39■□□□□ 0.54
SHD-201ENST00000543264 DYNAPQ8N1N2 210 aa18.39■□□□□ 0.53
SHD-201ENST00000543264 MYOZ3Q8TDC0 251 aa18.39■□□□□ 0.53
SHD-201ENST00000543264 PRAC2D3DTV9 90 aa18.38■□□□□ 0.53
SHD-201ENST00000543264 J3QR89 54 aa18.38■□□□□ 0.53
SHD-201ENST00000543264 SRSF1Q07955 248 aaKnown RBP eCLIP18.38■□□□□ 0.53
SHD-201ENST00000543264 PSMG3-AS1Q96PY0 264 aa18.37■□□□□ 0.53
SHD-201ENST00000543264 HIST1H4GQ99525 98 aa18.37■□□□□ 0.53
SHD-201ENST00000543264 IGLV2-18A0A075B6J9 118 aa18.37■□□□□ 0.53
SHD-201ENST00000543264 NDUFA3O95167 84 aa18.37■□□□□ 0.53
SHD-201ENST00000543264 TRGV3P03979 118 aa18.37■□□□□ 0.53
SHD-201ENST00000543264 SCGB1A1P11684 91 aa18.37■□□□□ 0.53
SHD-201ENST00000543264 SRSF2Q01130 221 aaKnown RBP18.37■□□□□ 0.53
SHD-201ENST00000543264 SPAG8Q99932 426 aaPredicted RBP18.37■□□□□ 0.53
SHD-201ENST00000543264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.36■□□□□ 0.53
SHD-201ENST00000543264 LINC01559Q495D7 138 aa18.36■□□□□ 0.53
SHD-201ENST00000543264 CFHR4Q92496 578 aa18.36■□□□□ 0.53
SHD-201ENST00000543264 TRAV26-2A0A0B4J265 109 aa18.36■□□□□ 0.53
SHD-201ENST00000543264 TTC9CQ8N5M4 171 aa18.36■□□□□ 0.53
SHD-201ENST00000543264 IL17RELQ6ZVW7 336 aa18.35■□□□□ 0.53
SHD-201ENST00000543264 APC2O95996 2303 aa18.35■□□□□ 0.53
SHD-201ENST00000543264 PRRG2O14669 202 aa18.35■□□□□ 0.53
SHD-201ENST00000543264 C5orf64Q2M2E5 130 aa18.35■□□□□ 0.53
SHD-201ENST00000543264 RNF182Q8N6D2 247 aa18.35■□□□□ 0.53
SHD-201ENST00000543264 DPM3Q9P2X0 92 aa18.35■□□□□ 0.53
SHD-201ENST00000543264 LAGE3Q14657 143 aa18.34■□□□□ 0.53
SHD-201ENST00000543264 CTSGP08311 255 aa18.34■□□□□ 0.53
SHD-201ENST00000543264 GAGE13Q4V321 117 aa18.34■□□□□ 0.53
SHD-201ENST00000543264 ZNF48Q96MX3 618 aaPredicted RBP18.34■□□□□ 0.53
SHD-201ENST00000543264 HLA-DRB4P13762 266 aa18.33■□□□□ 0.52
SHD-201ENST00000543264 EFNA4P52798 201 aa18.33■□□□□ 0.52
SHD-201ENST00000543264 NDPQ00604 133 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms