RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 TRBV7-9A0A0J9YWB2 115 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 UMAD1C9J7I0 102 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 TPT1P13693 172 aaKnown RBP13.24□□□□□ -0.29
COPS7A-216ENST00000543170 ERCC8Q13216 396 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 RRN3P1Q2M238 152 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 TMEM78Q5T7P6 136 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 ZFAND6Q6FIF0 208 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 AGPAT4-IT1Q9H0P7 198 aa13.24□□□□□ -0.29
COPS7A-216ENST00000543170 DYNC2H1Q8NCM8 4307 aaKnown RBP13.23□□□□□ -0.29
COPS7A-216ENST00000543170 PGPA6NDG6 321 aa13.23□□□□□ -0.29
COPS7A-216ENST00000543170 DIRC3C9JPN6 131 aa13.23□□□□□ -0.29
COPS7A-216ENST00000543170 NMBP08949 121 aa13.23□□□□□ -0.29
COPS7A-216ENST00000543170 CRISP2P16562 243 aa13.23□□□□□ -0.29
COPS7A-216ENST00000543170 LGALSLQ3ZCW2 172 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-216ENST00000543170 GFI1BQ5VTD9 330 aa13.23□□□□□ -0.29
COPS7A-216ENST00000543170 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
COPS7A-216ENST00000543170 KMT2CQ8NEZ4 4911 aaKnown RBP13.23□□□□□ -0.29
COPS7A-216ENST00000543170 TEX48A0A1B0GUV7 120 aa13.22□□□□□ -0.29
COPS7A-216ENST00000543170 NUPR2A6NF83 97 aa13.22□□□□□ -0.29
COPS7A-216ENST00000543170 KLLNB2CW77 178 aa13.22□□□□□ -0.29
COPS7A-216ENST00000543170 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
COPS7A-216ENST00000543170 VGLL1Q99990 258 aa13.22□□□□□ -0.29
COPS7A-216ENST00000543170 ZNF492Q9P255 531 aa13.22□□□□□ -0.29
COPS7A-216ENST00000543170 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 SERTM2A0A1B0GWG4 89 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 MAP1LC3B2A6NCE7 125 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 H7BYZ3 331 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 TAS2R60P59551 318 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 DPPA3Q6W0C5 159 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 MAP1LC3BQ9GZQ8 125 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.29
COPS7A-216ENST00000543170 A0A1W2PRE2 83 aa13.2□□□□□ -0.3
COPS7A-216ENST00000543170 CXorf65A6NEN9 183 aa13.2□□□□□ -0.3
COPS7A-216ENST00000543170 ZNF138P52744 262 aa13.2□□□□□ -0.3
COPS7A-216ENST00000543170 KIR3DS1Q14943 382 aa13.2□□□□□ -0.3
COPS7A-216ENST00000543170 C5orf17Q8NAS9 161 aa13.2□□□□□ -0.3
COPS7A-216ENST00000543170 A0A1B0GVG6 124 aa13.19□□□□□ -0.3
COPS7A-216ENST00000543170 C7orf71A4D174 169 aa13.19□□□□□ -0.3
COPS7A-216ENST00000543170 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
COPS7A-216ENST00000543170 PMS2P11Q13670 270 aa13.19□□□□□ -0.3
COPS7A-216ENST00000543170 ZFAND2AQ8N6M9 145 aa13.19□□□□□ -0.3
COPS7A-216ENST00000543170 LINC01587Q99440 93 aa13.19□□□□□ -0.3
COPS7A-216ENST00000543170 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
COPS7A-216ENST00000543170 CELA1Q9UNI1 258 aa13.19□□□□□ -0.3
COPS7A-216ENST00000543170 PLECQ15149 4684 aaKnown RBP13.19□□□□□ -0.3
COPS7A-216ENST00000543170 GGTLC3B5MD39 225 aa13.18□□□□□ -0.3
COPS7A-216ENST00000543170 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
COPS7A-216ENST00000543170 EIF5AL1Q6IS14 154 aaKnown RBP13.18□□□□□ -0.3
COPS7A-216ENST00000543170 SLC51BQ86UW2 128 aa13.18□□□□□ -0.3
COPS7A-216ENST00000543170 IQCF2Q8IXL9 164 aa13.18□□□□□ -0.3
COPS7A-216ENST00000543170 Q8TAT8 98 aa13.18□□□□□ -0.3
COPS7A-216ENST00000543170 PHLDA1Q8WV24 401 aaPredicted RBP13.18□□□□□ -0.3
COPS7A-216ENST00000543170 NIPSNAP3BQ9BS92 247 aa13.18□□□□□ -0.3
COPS7A-216ENST00000543170 ZNF705GA8MUZ8 300 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-216ENST00000543170 C11orf94C9JXX5 98 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 J3KRW8 73 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 SPART-AS1P0CW21 52 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 FHITP49789 147 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 FGF8P55075 233 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-216ENST00000543170 CD300CQ08708 224 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-216ENST00000543170 ZNF493Q6ZR52 646 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 GOLT1AQ6ZVE7 132 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 C9orf62Q8N4C0 152 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 MBD3L1Q8WWY6 194 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 C16orf74Q96GX8 76 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 PYGO2Q9BRQ0 406 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 NKX6-2Q9C056 277 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-216ENST00000543170 DKK2Q9UBU2 259 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 YTHDF2Q9Y5A9 579 aaKnown RBP13.17□□□□□ -0.3
COPS7A-216ENST00000543170 ARL2-SNX15V9GYD0 113 aa13.17□□□□□ -0.3
COPS7A-216ENST00000543170 TRAV12-3A0A0B4J271 114 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 TCRAP04437 139 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 GPX1P07203 203 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 RAB5CP51148 216 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 GNG5P63218 68 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 FAM213BQ8TBF2 198 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 RNASE8Q8TDE3 154 aaKnown RBP13.16□□□□□ -0.3
COPS7A-216ENST00000543170 TMEM263Q8WUH6 116 aaKnown RBP13.16□□□□□ -0.3
COPS7A-216ENST00000543170 LINC00467Q9BRT7 94 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 TMPRSS5Q9H3S3 457 aa13.16□□□□□ -0.3
COPS7A-216ENST00000543170 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
COPS7A-216ENST00000543170 K7EQM0 130 aa13.15□□□□□ -0.3
COPS7A-216ENST00000543170 ZNF324O75467 553 aaPredicted RBP13.15□□□□□ -0.3
COPS7A-216ENST00000543170 EMP1P54849 157 aa13.15□□□□□ -0.3
COPS7A-216ENST00000543170 SUMO1P63165 101 aaKnown RBP13.15□□□□□ -0.3
COPS7A-216ENST00000543170 BTN1A1Q13410 526 aa13.15□□□□□ -0.3
COPS7A-216ENST00000543170 FAM222AQ5U5X8 452 aa13.15□□□□□ -0.3
COPS7A-216ENST00000543170 EPDR1Q9UM22 224 aa13.15□□□□□ -0.3
COPS7A-216ENST00000543170 KLK5Q9Y337 293 aaPredicted RBP13.15□□□□□ -0.3
COPS7A-216ENST00000543170 FBLL1A6NHQ2 334 aaKnown RBP13.14□□□□□ -0.31
COPS7A-216ENST00000543170 FAM74A7A6NL05 159 aa13.14□□□□□ -0.31
COPS7A-216ENST00000543170 LYRM9A8MSI8 78 aa13.14□□□□□ -0.31
COPS7A-216ENST00000543170 AZU1P20160 251 aa13.14□□□□□ -0.31
COPS7A-216ENST00000543170 C12orf74Q32Q52 190 aa13.14□□□□□ -0.31
COPS7A-216ENST00000543170 PRR9Q5T870 116 aa13.14□□□□□ -0.31
COPS7A-216ENST00000543170 Q6ZTC4 211 aa13.14□□□□□ -0.31
COPS7A-216ENST00000543170 CYB561D1Q8N8Q1 229 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms