RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
C2CD3-219ENST00000542930 H3BTX0 84 aa6.09□□□□□ -1.43
C2CD3-219ENST00000542930 MED6O75586 246 aa6.09□□□□□ -1.43
C2CD3-219ENST00000542930 GPX1P07203 203 aa6.09□□□□□ -1.43
C2CD3-219ENST00000542930 OPCMLQ14982 345 aa6.09□□□□□ -1.43
C2CD3-219ENST00000542930 LINC00305Q7Z4B0 112 aa6.09□□□□□ -1.43
C2CD3-219ENST00000542930 RASL10AQ92737 203 aa6.09□□□□□ -1.43
C2CD3-219ENST00000542930 SAT2Q96F10 170 aaPredicted RBP6.09□□□□□ -1.43
C2CD3-219ENST00000542930 SMCO3A2RU48 225 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 PFN1P07737 140 aaKnown RBP6.08□□□□□ -1.44
C2CD3-219ENST00000542930 NMBP08949 121 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 OR4E1P0C645 316 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 IGLC2P0DOY2 106 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 CRISP2P16562 243 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 ERCC8Q13216 396 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 NEDD8Q15843 81 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 TOR2AQ5JU69 321 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 LELP1Q5T871 98 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 PXDC1Q5TGL8 231 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 FAAP20Q6NZ36 180 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 OR51S1Q8NGJ8 323 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 ATP6V0E2Q8NHE4 81 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 LINC00477Q96M19 166 aa6.08□□□□□ -1.44
C2CD3-219ENST00000542930 TRAV4A0A0B4J268 109 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 PIGBOS1A0A0B4J2F0 54 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 H3BQ15 152 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 K7EPK0 472 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 WRBO00258 174 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 SYNGR2O43760 224 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 HPGDSO60760 199 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 SRPXP78539 464 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 GUK1Q16774 197 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 SPANXN5Q5MJ07 72 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 MRPL53Q96EL3 112 aaKnown RBP6.07□□□□□ -1.44
C2CD3-219ENST00000542930 AGPAT4-IT1Q9H0P7 198 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 DPH3P1Q9H4G8 78 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 Q9H521 79 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 RPH3ALQ9UNE2 315 aa6.07□□□□□ -1.44
C2CD3-219ENST00000542930 FABP12A6NFH5 140 aa6.06□□□□□ -1.44
C2CD3-219ENST00000542930 DISC1C4P0D8 188 aa6.06□□□□□ -1.44
C2CD3-219ENST00000542930 ANXA3P12429 323 aa6.06□□□□□ -1.44
C2CD3-219ENST00000542930 Q6ZQT7 251 aa6.06□□□□□ -1.44
C2CD3-219ENST00000542930 HSD17B11Q8NBQ5 300 aa6.06□□□□□ -1.44
C2CD3-219ENST00000542930 OR4C5Q8NGB2 326 aa6.06□□□□□ -1.44
C2CD3-219ENST00000542930 SPXQ9BT56 116 aa6.06□□□□□ -1.44
C2CD3-219ENST00000542930 STRAPQ9Y3F4 350 aaKnown RBP6.06□□□□□ -1.44
C2CD3-219ENST00000542930 A0A0D9SG52 128 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 FAM25AB3EWG3 89 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 FAM25CB3EWG5 89 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 FAM25GB3EWG6 89 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 GGTLC3B5MD39 225 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 H3BP45 60 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 M0R3E3 92 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 ZNF253O75346 499 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 SLC25A6P12236 298 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 GATA1P15976 413 aaPredicted RBP6.05□□□□□ -1.44
C2CD3-219ENST00000542930 LSM3P62310 102 aaKnown RBP6.05□□□□□ -1.44
C2CD3-219ENST00000542930 SSBP1Q04837 148 aaKnown RBP6.05□□□□□ -1.44
C2CD3-219ENST00000542930 ODF1Q14990 250 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 PRR9Q5T870 116 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 Q8N3U1 123 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 ZFAND2AQ8N6M9 145 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 C15orf40Q8WUR7 153 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 RMI2Q96E14 147 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 YIPF6Q96EC8 236 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 LINC01600Q96MT4 127 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 PRRT1Q99946 306 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 SRRQ9GZT4 340 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 NPVFQ9HCQ7 196 aa6.05□□□□□ -1.44
C2CD3-219ENST00000542930 TRAV8-1A0A0A6YYK1 113 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 GOSR2O14653 212 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 COX7A2P2O60397 106 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 POLR2GP62487 172 aaKnown RBP eCLIP6.04□□□□□ -1.44
C2CD3-219ENST00000542930 SLC38A11Q08AI6 406 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 FFAR4Q5NUL3 377 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 FAM122CQ6P4D5 195 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 DAZ4Q86SG3 579 aaKnown RBP6.04□□□□□ -1.44
C2CD3-219ENST00000542930 SCGB3A2Q96PL1 93 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 GTSF1LQ9H1H1 148 aa6.04□□□□□ -1.44
C2CD3-219ENST00000542930 DAZ3Q9NR90 486 aaKnown RBP6.04□□□□□ -1.44
C2CD3-219ENST00000542930 IGHV3-16A0A0C4DH30 117 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 FNDC10F2Z333 226 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 C14orf177Q52M58 125 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 MUC21Q5SSG8 566 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 TMEM78Q5T7P6 136 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 C10orf113Q5VZT2 155 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 ZNF546Q86UE3 836 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 SH3BGRL3Q9H299 93 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 EXTL2Q9UBQ6 330 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
C2CD3-219ENST00000542930 TRBV19A0A075B6N1 114 aa6.02□□□□□ -1.45
C2CD3-219ENST00000542930 IGKV2D-24A0A075B6R9 120 aa6.02□□□□□ -1.45
C2CD3-219ENST00000542930 AKAIN1P0CW23 69 aa6.02□□□□□ -1.45
C2CD3-219ENST00000542930 RRAS2P62070 204 aaPredicted RBP6.02□□□□□ -1.45
C2CD3-219ENST00000542930 NCS1P62166 190 aa6.02□□□□□ -1.45
C2CD3-219ENST00000542930 VWC2Q2TAL6 325 aa6.02□□□□□ -1.45
C2CD3-219ENST00000542930 MZT2AQ6P582 158 aa6.02□□□□□ -1.45
C2CD3-219ENST00000542930 PRADC1Q9BSG0 188 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms