RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 NPSP0C0P6 89 aa10.48□□□□□ -0.73
TNC-212ENST00000542877 GATA3P23771 443 aa10.48□□□□□ -0.73
TNC-212ENST00000542877 ZNF625Q96I27 306 aaPredicted RBP10.48□□□□□ -0.73
TNC-212ENST00000542877 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 K7EP13 123 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 FXYD5Q96DB9 178 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 HLA-DRB4P13762 266 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 BVES-AS1Q5T3Y7 98 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 HLA-DRB4X5D2U9 266 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 F8WEM9 126 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 SIVA1O15304 175 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 WIPF3A6NGB9 483 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 PRR20EP86478 221 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 PRR20CP86479 221 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 PRR20DP86480 221 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 PRR20BP86481 221 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 PRR20AP86496 221 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 SPANXDQ9BXN6 97 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 ROS1P08922 2347 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 ABCA1O95477 2261 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 DOPEY2Q9Y3R5 2298 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 IGHV1OR15-1A0A075B7D0 117 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 INS-IGF2F8WCM5 200 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 NDUFA4O00483 81 aa10.47□□□□□ -0.73
TNC-212ENST00000542877 TCF15Q12870 199 aa10.46□□□□□ -0.73
TNC-212ENST00000542877 SOCS3O14543 225 aa10.46□□□□□ -0.73
TNC-212ENST00000542877 ZC2HC1AQ96GY0 325 aa10.46□□□□□ -0.73
TNC-212ENST00000542877 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.73
TNC-212ENST00000542877 DOCK11Q5JSL3 2073 aa10.46□□□□□ -0.74
TNC-212ENST00000542877 ZNF503-AS2A6NEH8 195 aa10.46□□□□□ -0.74
TNC-212ENST00000542877 F8VRH5 84 aa10.46□□□□□ -0.74
TNC-212ENST00000542877 IGLV1-44P01699 117 aa10.46□□□□□ -0.74
TNC-212ENST00000542877 SMIM2Q9BVW6 85 aa10.46□□□□□ -0.74
TNC-212ENST00000542877 ZNF134P52741 427 aa10.46□□□□□ -0.74
TNC-212ENST00000542877 TSSC4Q9Y5U2 329 aaPredicted RBP10.46□□□□□ -0.74
TNC-212ENST00000542877 A0A1W2PPM0 123 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 NPYP01303 97 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 SPINK13Q1W4C9 94 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 ETDBQ3ZM63 59 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 MRPL35Q9NZE8 188 aaKnown RBP10.45□□□□□ -0.74
TNC-212ENST00000542877 MYO7BQ6PIF6 2116 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 RLFQ13129 1914 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 IGLC1P0CG04 106 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 DUX4L9Q6RFH8 374 aaPredicted RBP10.45□□□□□ -0.74
TNC-212ENST00000542877 FNDC1Q4ZHG4 1894 aaPredicted RBP10.45□□□□□ -0.74
TNC-212ENST00000542877 PLXNA4Q9HCM2 1894 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 IGHV1-69DA0A0B4J2H0 117 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 KNCNA6PVL3 124 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 IGHV1-69P01742 117 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 ANXA2RQ3ZCQ2 193 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 CEND1Q8N111 149 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 MSMBP08118 114 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 Q8NFD4 153 aa10.45□□□□□ -0.74
TNC-212ENST00000542877 G3V318 75 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 RUSC1-AS1Q66K80 236 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 WIPF2Q8TF74 440 aaPredicted RBP10.44□□□□□ -0.74
TNC-212ENST00000542877 IGLV3-9A0A075B6K5 115 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 LTAP01374 205 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 CEACAM8P31997 349 aaPredicted RBP10.44□□□□□ -0.74
TNC-212ENST00000542877 C20orf78Q9BR46 151 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 TRBV25-1A0A075B6N4 114 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 IGFL3Q6UXB1 125 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 UNQ6494/PRO21346Q6UXR6 183 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 PRO1854Q9UHT4 67 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 IGHV2-70DA0A0C4DH43 119 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 DEFB130BP0DP73 79 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 DEFB130AP0DP74 79 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 THSD7BQ9C0I4 1608 aa10.44□□□□□ -0.74
TNC-212ENST00000542877 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
TNC-212ENST00000542877 LY6G6EA0A0G2JKS1 128 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 VWC2Q2TAL6 325 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 TPSG1Q9NRR2 321 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 KLK9Q9UKQ9 250 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 U3KQA8 63 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 FGF6P10767 208 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 CDKN1BP46527 198 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 KLF5Q13887 457 aaPredicted RBP10.43□□□□□ -0.74
TNC-212ENST00000542877 UTF1Q5T230 341 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 VOPP1Q96AW1 172 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 K7EN84 100 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 GAGE4Q13068 117 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 GAGE5Q13069 117 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 SSC4DQ8WTU2 575 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 NDUFA12Q9UI09 145 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 LINC01619G3V211 115 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 CDK2AP2O75956 126 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 SPTBN2O15020 2390 aa10.43□□□□□ -0.74
TNC-212ENST00000542877 ACACAQ13085 2346 aa10.42□□□□□ -0.74
TNC-212ENST00000542877 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
TNC-212ENST00000542877 RNF114Q9Y508 228 aa10.42□□□□□ -0.74
TNC-212ENST00000542877 WNK2Q9Y3S1 2297 aa10.42□□□□□ -0.74
TNC-212ENST00000542877 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
TNC-212ENST00000542877 MYLKQ15746 1914 aa10.42□□□□□ -0.74
TNC-212ENST00000542877 YLPM1P49750 1951 aaKnown RBP10.42□□□□□ -0.74
TNC-212ENST00000542877 UBE2DNLQ8IWF7 75 aa10.42□□□□□ -0.74
TNC-212ENST00000542877 HEATR5AQ86XA9 2040 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms