RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 IGHV3-66A0A0C4DH42 116 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 A8MZ25 164 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 DIRC3C9JPN6 131 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 H3BTX0 84 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 ISLRO14498 428 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 CBLN1P23435 193 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 GNG4P50150 75 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 SLURP1P55000 103 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 RPL23P62829 140 aaKnown RBP8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 TCF24Q7RTU0 167 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 IGF2BP2-AS1Q96M15 143 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 BIN3Q9NQY0 253 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 C19orf73Q9NVV2 129 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 SOCS3O14543 225 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 FOLR2P14207 255 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 ID1P41134 155 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 CENPWQ5EE01 88 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 Q8N1Y9 231 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 ANAPC16Q96DE5 110 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 C16orf92Q96LL3 132 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 DERL1Q9BUN8 251 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 TMEM242Q9NWH2 141 aa8.64□□□□□ -1.03
SRGAP1-205ENST00000542841 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 TRAV25A0A0B4J276 109 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 C7orf77A4D0Y5 90 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 PPP1R2P9O14990 202 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 MT-ND4LP03901 98 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 GNG5P63218 68 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 PAFAH1B2P68402 229 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 PSG3Q16557 428 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 GOLT1AQ6ZVE7 132 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 ZFP30Q9Y2G7 519 aa8.63□□□□□ -1.03
SRGAP1-205ENST00000542841 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 RBMY1BA6NDE4 496 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 CXorf65A6NEN9 183 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 RBMY1EA6NEQ0 496 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 TSPAN4O14817 238 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 LTAP01374 205 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 CSN3P07498 182 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 RBMY1DP0C7P1 496 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 FLI1Q01543 452 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 ADIRFQ15847 76 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 LCN12Q6JVE5 192 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 ATRAIDQ6UW56 229 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 ISOC2Q96AB3 205 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 TUBA4BQ9H853 241 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 PPP1R14DQ9NXH3 145 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 RPH3ALQ9UNE2 315 aa8.62□□□□□ -1.03
SRGAP1-205ENST00000542841 M0R3E3 92 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 GCGP01275 180 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 Q86TA4 180 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 TMEM183AQ8IXX5 376 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 OR2K2Q8NGT1 345 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 OCC1Q8TAD7 63 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 DYNLRB2Q8TF09 96 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 DCANP1Q8TF63 244 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 MLST8Q9BVC4 326 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 SMCO4Q9NRQ5 59 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
SRGAP1-205ENST00000542841 K7EQG2 157 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 IGLV2-11P01706 119 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 IGLV2-8P01709 118 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 SAPCD1Q5SSQ6 148 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 FAM231DQ6ZW35 169 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 MS4A6AQ9H2W1 248 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 OSTCQ9NRP0 149 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 PSG8Q9UQ74 426 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 LENEPQ9Y5L5 61 aa8.6□□□□□ -1.03
SRGAP1-205ENST00000542841 PLECQ15149 4684 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 TRAV34A0A0B4J273 112 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 TRBV7-9A0A0J9YWB2 115 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 DNASE2O00115 360 aaPredicted RBP8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 IGLV1-51P01701 117 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 EDN2P20800 178 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 RNF212Q495C1 297 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 C9orf47Q6ZRZ4 202 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 C15orf54Q8N8G6 183 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 SFRP2Q96HF1 295 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 LINC00479Q96M42 142 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 NDFIP1Q9BT67 221 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 ZNF492Q9P255 531 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 PCLOQ9Y6V0 5065 aa8.59□□□□□ -1.03
SRGAP1-205ENST00000542841 PGPEP1LA6NFU8 196 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 H7BYZ3 331 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 K7EN84 100 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 HLA-DMBP28068 263 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 DEFB114Q30KQ6 69 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 TMEM78Q5T7P6 136 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 PRNTQ86SH4 94 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms