RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 NBEAQ8NFP9 2946 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 ABCA2Q9BZC7 2435 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 FAM181BA6NEQ2 426 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 M0R2Z0 102 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 IGHG4P01861 327 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 C3orf79P0CE67 100 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 HIST1H1AQ02539 215 aaPredicted RBP7.62□□□□□ -1.19
SS18-205ENST00000542420 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 BCL6BQ8N143 479 aaPredicted RBP7.62□□□□□ -1.19
SS18-205ENST00000542420 NPFFR1Q9GZQ6 430 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 SMPXQ9UHP9 88 aa7.62□□□□□ -1.19
SS18-205ENST00000542420 HRNRQ86YZ3 2850 aaPredicted RBP7.61□□□□□ -1.19
SS18-205ENST00000542420 FABP5P3A8MUU1 101 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 IGLC6P0CF74 106 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 SAMD13Q5VXD3 122 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 CLEC19AQ6UXS0 136 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 C9orf139Q6ZV77 190 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 SSBP4Q9BWG4 385 aaPredicted RBP7.61□□□□□ -1.19
SS18-205ENST00000542420 TRAV40A0A0B4J280 105 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 GAGE12BA1L429 117 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 IGHV3-23P01764 117 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
SS18-205ENST00000542420 C9orf47Q6ZRZ4 202 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 URB1-AS1Q96HZ7 61 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 SPTBN4Q9H254 2564 aa7.61□□□□□ -1.19
SS18-205ENST00000542420 CACNA1AO00555 2505 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 A0A0G2JLM5 398 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 TRBV7-9A0A0J9YWB2 115 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 C2orf70A6NJV1 201 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 G3V318 75 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 ARMS2P0C7Q2 107 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 RNASEKQ6P5S7 137 aaKnown RBP7.6□□□□□ -1.19
SS18-205ENST00000542420 C8orf49Q96NF6 230 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 IGKV2-40A0A087WW87 121 aaPredicted RBP7.6□□□□□ -1.19
SS18-205ENST00000542420 IGKV2D-40P01614 121 aaPredicted RBP7.6□□□□□ -1.19
SS18-205ENST00000542420 GLMPQ8WWB7 406 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 TMEM70Q9BUB7 260 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
SS18-205ENST00000542420 NBASA2RRP1 2371 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 ADGRG4Q8IZF6 3080 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 IGHV4-30-2A0A087WSY4 118 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 G3V4G9 280 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 TRGV3P03979 118 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 NTF3P20783 257 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 FAM104BQ5XKR9 115 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 CFAP161Q6P656 301 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 PET117Q6UWS5 81 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 DEFB125Q8N687 156 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 FER1L6-AS1Q8NA97 138 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 PSMG3-AS1Q96PY0 264 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 TP73-AS1Q9UF72 201 aa7.59□□□□□ -1.19
SS18-205ENST00000542420 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 ARL3P36405 182 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 AMMECR1LQ6DCA0 310 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 TMEM191AQ9H0A3 160 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 ZNF138P52744 262 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 Q5PR19 223 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 LYZL1Q6UWQ5 148 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 SPATA12Q7Z6I5 190 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 ATOH7Q8N100 152 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 LINC01356Q8N9X3 169 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 VGLL1Q99990 258 aa7.58□□□□□ -1.2
SS18-205ENST00000542420 TRAV9-2A0A087WT02 112 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 TRAV8-6A0A0B4J262 113 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 LINC01548A6NM66 108 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 K7EMT4 169 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 OVOL1O14753 267 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 LEPROTL1O95214 131 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 IGLL1P15814 213 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 CFHR3Q02985 330 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 TMEM78Q5T7P6 136 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 ORMDL3Q8N138 153 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 TRAV8-2A0A0B4J237 113 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 LINC01546A6NGU7 62 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 IGHV4-38-2P0DP08 117 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 BVES-AS1Q5T3Y7 98 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 UFSP1Q6NVU6 142 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 EBLN2Q6P2I7 272 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 LINC00477Q96M19 166 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
SS18-205ENST00000542420 IGHV4-4A0A075B6R2 117 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 H3BUX3 64 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 CACNG7P62955 275 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 FOXE3Q13461 319 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 TMEM219Q86XT9 240 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 LRRC75A-AS1Q8N1F1 130 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 OR10AG1Q8NH19 301 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 MAP1LC3CQ9BXW4 147 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 KALRNO60229 2985 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 A0A096LNT2 108 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 SYS1-DBNDD2H3BUS1 97 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 LOXL1Q08397 574 aaPredicted RBP7.56□□□□□ -1.2
SS18-205ENST00000542420 PSMG4Q5JS54 123 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
SS18-205ENST00000542420 FA2HQ7L5A8 372 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms