RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TMEM219Q86XT9 240 aa6.34□□□□□ -1.39
PDLIM5-221ENST00000542407 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
PDLIM5-221ENST00000542407 IL17DQ8TAD2 202 aa6.34□□□□□ -1.39
PDLIM5-221ENST00000542407 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 ATP5LO75964 103 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 CCL17Q92583 94 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 DYNLRB1Q9NP97 96 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 KAAG1Q9UBP8 84 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 F11RQ9Y624 299 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 ATRXP46100 2492 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 MAP1BP46821 2468 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 HCFC1P51610 2035 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 SAA2P0DJI9 122 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 MYOD1P15172 320 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 RTL8BQ17RB0 113 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 TMEM30BQ3MIR4 351 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 PRELID3AQ96N28 172 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 TMEM167BQ9NRX6 74 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 RPUSD1Q9UJJ7 312 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 CHD8Q9HCK8 2581 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 PCNX1Q96RV3 2341 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 APOMO95445 188 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 SLC25A48Q6ZT89 311 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 LINC00336Q6ZUF6 198 aa6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 WIPF2Q8TF74 440 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 H1FXQ92522 213 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-221ENST00000542407 TRAV3A0A0B4J244 114 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 A0A1W2PRD5 423 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 A0A1W2PRF3 423 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 A0A1W2PRM7 423 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 SLC25A5P05141 298 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 OR5AL1P0C617 328 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 TMEM200BQ69YZ2 307 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 C11orf71Q6IPW1 123 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 ZNF502Q8TBZ5 544 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 PGLYRP4Q96LB8 373 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 NABP2Q9BQ15 211 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 RETNQ9HD89 108 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 ARFGEF3Q5TH69 2177 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 FSTL3O95633 263 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 OR8A1Q8NGG7 326 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 IGF2BP2-AS1Q96M15 143 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 MRPL32Q9BYC8 188 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 ZNRD1Q9P1U0 126 aa6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 FOXA2Q9Y261 457 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-221ENST00000542407 TRAV5A0A0B4J249 113 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 NCR2O95944 276 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 CCL3L1P16619 93 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 HBBP68871 147 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 TAL2Q16559 108 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 IL17RELQ6ZVW7 336 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 MOB3BQ86TA1 216 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 CHCHD1Q96BP2 118 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 LSM4Q9Y4Z0 139 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 HRNRQ86YZ3 2850 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 A1L4Q6 167 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 FAM90A9PA6NNJ1 464 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 CHEK1O14757 476 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 NMUP48645 174 aa6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 AMMECR1Q9Y4X0 333 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-221ENST00000542407 A0A1W2PPR1 153 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 LYNX1G3V0Z9 82 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 LYNX1P0DP58 116 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 GCSHP23434 173 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 KIR2DS2P43631 304 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 ERVK-16P61578 105 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 UBE2L3P68036 154 aaKnown RBP6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 ATP6V0E2Q8NHE4 81 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 ITLN2Q8WWU7 325 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 ZNF503Q96F45 646 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 ZNF714Q96N38 554 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 SLC25A39Q9BZJ4 359 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 ICE1Q9Y2F5 2266 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 PIEZO1Q92508 2521 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 NDUFB3O43676 98 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 TMEM155Q4W5P6 130 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 Q6Q795 121 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 ZNF833PQ6ZTB9 187 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 STHQ8IWL8 128 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 AJUBAQ96IF1 538 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 SPANXCQ9NY87 97 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 C21orf62Q9NYP8 219 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 C1RLQ9NZP8 487 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 K7ERJ3 54 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 NDUFA7O95182 113 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 HERVK_113P63121 156 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 S1PR3Q99500 378 aa6.3□□□□□ -1.4
PDLIM5-221ENST00000542407 FAM236DA0A1B0GTK5 79 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 K7EMI3 77 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 FAM236CP0DP71 79 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 GNLYP22749 145 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 TAS2R45P59539 299 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 LINC01545Q5VT33 79 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 DCHS2Q6V1P9 2916 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 TEX50A0A1B0GTY4 177 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 A0A1B0GWB2 263 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 A8MWL6 223 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms