RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 RPL7P18124 248 aaKnown RBP7.36□□□□□ -1.23
CNOT4-212ENST00000541284 C12orf54Q6X4T0 127 aa7.36□□□□□ -1.23
CNOT4-212ENST00000541284 RAXQ9Y2V3 346 aa7.36□□□□□ -1.23
CNOT4-212ENST00000541284 ABCA4P78363 2273 aa7.36□□□□□ -1.23
CNOT4-212ENST00000541284 IGHV3OR16-8A0A075B7F1 116 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 SNAI2O43623 268 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 CT45A10P0DMU9 189 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 RPS20P60866 119 aaKnown RBP7.35□□□□□ -1.23
CNOT4-212ENST00000541284 ERCC8Q13216 396 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 HES1Q14469 280 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 SAPCD1Q5SSQ6 148 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 ADAMTSL5Q6ZMM2 481 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 FER1L6-AS1Q8NA97 138 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 TIMM8BQ9Y5J9 83 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-212ENST00000541284 IGLV2-18A0A075B6J9 118 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 TRAV8-2A0A0B4J237 113 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 OOSP1A8MZH6 123 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 CACNG7P62955 275 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 OR8A1Q8NGG7 326 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 ZMAT4Q9H898 229 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 CBY1Q9Y3M2 126 aa7.35□□□□□ -1.23
CNOT4-212ENST00000541284 HSBP1L1C9JCN9 74 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 BUB3O43684 328 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 NDUFS7O75251 213 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 MINOS1Q5TGZ0 78 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 JMJD8Q96S16 334 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 RABAC1Q9UI14 185 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 MINOS1-NBL1R4GNA1 71 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 ABCA2Q9BZC7 2435 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 SPTBN2O15020 2390 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 IGKV3D-20A0A0C4DH25 116 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 LINC01548A6NM66 108 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 HBDP02042 147 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 CDKN1BP46527 198 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 KLRB1Q12918 225 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 AMMECR1LQ6DCA0 310 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 PRSS57Q6UWY2 283 aa7.34□□□□□ -1.23
CNOT4-212ENST00000541284 IGHV3-35A0A0C4DH35 117 aa7.34□□□□□ -1.24
CNOT4-212ENST00000541284 FBLL1A6NHQ2 334 aaKnown RBP7.34□□□□□ -1.24
CNOT4-212ENST00000541284 CCL21O00585 134 aa7.34□□□□□ -1.24
CNOT4-212ENST00000541284 Q6ZQT7 251 aa7.34□□□□□ -1.24
CNOT4-212ENST00000541284 RNF182Q8N6D2 247 aa7.34□□□□□ -1.24
CNOT4-212ENST00000541284 OR1N2Q8NGR9 330 aa7.34□□□□□ -1.24
CNOT4-212ENST00000541284 FAM110DQ8TAY7 271 aaPredicted RBP7.34□□□□□ -1.24
CNOT4-212ENST00000541284 NCBP2LA6PVI3 153 aaKnown RBP7.33□□□□□ -1.24
CNOT4-212ENST00000541284 UFSP1Q6NVU6 142 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 DKK2Q9UBU2 259 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 TPRP12270 2363 aaKnown RBP7.33□□□□□ -1.24
CNOT4-212ENST00000541284 TMEM11P17152 192 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 TMEM97Q5BJF2 176 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 IL17RELQ6ZVW7 336 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 HHLA3Q9XRX5 114 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 IGHV7-4-1A0A0J9YVY3 117 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-212ENST00000541284 TWIST1Q15672 202 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 C19orf54Q5BKX5 351 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 CCDC144NLQ6NUI1 221 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 PIFOQ8TCI5 191 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 IFI27L1Q96BM0 104 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 TIMD4Q96H15 378 aa7.33□□□□□ -1.24
CNOT4-212ENST00000541284 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 RBAKDNA6NC62 111 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 ATP6V0E1O15342 81 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 VAMP3Q15836 100 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 C15orf32Q32M92 178 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 U3KQE9 123 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 IGKV2D-26A0A0A0MRZ7 120 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 SMAD7O15105 426 aaKnown RBP7.32□□□□□ -1.24
CNOT4-212ENST00000541284 CKS2P33552 79 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 BMI1P35226 326 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 S100A7AQ86SG5 101 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 OR4C5Q8NGB2 326 aa7.32□□□□□ -1.24
CNOT4-212ENST00000541284 ODF1Q14990 250 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 THYN1Q9P016 225 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 TRGV3P03979 118 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 C7orf71A4D174 169 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 SEC11AP67812 179 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 WFDC3Q8IUB2 231 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 NRACQ8N912 160 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
CNOT4-212ENST00000541284 PRSS47A8MTI9 375 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 FABP5P3A8MUU1 101 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 G3V318 75 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 TNFRSF6BO95407 300 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 PPBPP02775 128 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 CLEC3BP05452 202 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 PPIFP30405 207 aaKnown RBP7.3□□□□□ -1.24
CNOT4-212ENST00000541284 TCTAP57738 103 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 ANK3Q12955 4377 aaKnown RBP7.3□□□□□ -1.24
CNOT4-212ENST00000541284 SIVA1O15304 175 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 PCP4P48539 62 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 PRR9Q5T870 116 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 IGHV3-66A0A0C4DH42 116 aa7.3□□□□□ -1.24
CNOT4-212ENST00000541284 EVI2AP22794 236 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms