RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 NEU1Q99519 415 aa9.27□□□□□ -0.93
AP003559.1-201ENST00000540906 AGPAT4-IT1Q9H0P7 198 aa9.27□□□□□ -0.93
AP003559.1-201ENST00000540906 SAV1Q9H4B6 383 aaPredicted RBP9.27□□□□□ -0.93
AP003559.1-201ENST00000540906 RPP21Q9H633 154 aaKnown RBP9.27□□□□□ -0.93
AP003559.1-201ENST00000540906 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
AP003559.1-201ENST00000540906 NPIPB6E9PJ23 425 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 FOSL1P15407 271 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 CBLN1P23435 193 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 FABP9Q0Z7S8 132 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 MRPL54Q6P161 138 aaKnown RBP9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 ARL6IP6Q8N6S5 226 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 GTSF1Q8WW33 167 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 UFC1Q9Y3C8 167 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 A0A1W2PS18 150 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 A8MWP6 167 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 KLF5Q13887 457 aaPredicted RBP9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 NUP35Q8NFH5 326 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 OR11H1Q8NG94 326 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 NRN1Q9NPD7 142 aa9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
AP003559.1-201ENST00000540906 A0A1W2PRX2 142 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 C5orf52A6NGY3 159 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 C2orf70A6NJV1 201 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 F6UB75 175 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 LGALS9O00182 355 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 P01737 135 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 Q6ZQT7 251 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
AP003559.1-201ENST00000540906 IZUMO1RA6ND01 250 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 SH2D1AO60880 128 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 MEOX2P50222 304 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 WFDC3Q8IUB2 231 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 ZNF738Q8NE65 137 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 MRPL53Q96EL3 112 aaKnown RBP9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 TRAV9-1A0A075B6T8 112 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 HIGD1CA8MV81 97 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 LINC01619G3V211 115 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 TFPI2P48307 235 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 NDUFA6P56556 154 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 GFI1BQ5VTD9 330 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 COX8CQ7Z4L0 72 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 OR2D3Q8NGH3 330 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 OR1N2Q8NGR9 330 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 DCANP1Q8TF63 244 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 DLX4Q92988 240 aaPredicted RBP9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 DAZAP1Q96EP5 407 aaKnown RBP9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 RAX2Q96IS3 184 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 BIN3Q9NQY0 253 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 TRAPPC1Q9Y5R8 145 aa9.24□□□□□ -0.93
AP003559.1-201ENST00000540906 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
AP003559.1-201ENST00000540906 SETD2Q9BYW2 2564 aaPredicted RBP9.23□□□□□ -0.93
AP003559.1-201ENST00000540906 PRR9Q5T870 116 aa9.23□□□□□ -0.93
AP003559.1-201ENST00000540906 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
AP003559.1-201ENST00000540906 PGLYRP4Q96LB8 373 aa9.23□□□□□ -0.93
AP003559.1-201ENST00000540906 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
AP003559.1-201ENST00000540906 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
AP003559.1-201ENST00000540906 A0A1B0GUS0 222 aa9.22□□□□□ -0.93
AP003559.1-201ENST00000540906 KRTAP10-3P60369 221 aa9.22□□□□□ -0.93
AP003559.1-201ENST00000540906 CT83Q5H943 113 aa9.22□□□□□ -0.93
AP003559.1-201ENST00000540906 MS4A6AQ9H2W1 248 aa9.22□□□□□ -0.93
AP003559.1-201ENST00000540906 IFITM10A6NMD0 228 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 SNURFLB1AK76 121 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 CT45A10P0DMU9 189 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 SCGB2A2Q13296 93 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 C11orf21Q9P2W6 132 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 NAT8BQ9UHF3 227 aa9.21□□□□□ -0.93
AP003559.1-201ENST00000540906 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
AP003559.1-201ENST00000540906 S100A6P06703 90 aa9.21□□□□□ -0.94
AP003559.1-201ENST00000540906 ZNF138P52744 262 aa9.21□□□□□ -0.94
AP003559.1-201ENST00000540906 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
AP003559.1-201ENST00000540906 OR4B1Q8NGF8 309 aa9.21□□□□□ -0.94
AP003559.1-201ENST00000540906 ADARB2-AS1A8MUL3 147 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 A8MWL6 223 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 K7EQG2 157 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 UBE2CO00762 179 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 ZNF688P0C7X2 276 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 PROK1P58294 105 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 KIAA1644Q3SXP7 199 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 SMUG1Q53HV7 270 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 FAM162BQ5T6X4 162 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 DPF1Q92782 380 aa9.2□□□□□ -0.94
AP003559.1-201ENST00000540906 FBLL1A6NHQ2 334 aaKnown RBP9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 NDUFA7O95182 113 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 CSN3P07498 182 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 HIST1H1AQ02539 215 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms