RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CD300CQ08708 224 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 ICAM4Q14773 271 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 C9orf47Q6ZRZ4 202 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 UBE2DNLQ8IWF7 75 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 ATP5SQ99766 215 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 OR51M1Q9H341 326 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 HSPB11Q9Y547 144 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
DDB1-215ENST00000539712 CRISP2P16562 243 aa11.72□□□□□ -0.53
DDB1-215ENST00000539712 VGLL1Q99990 258 aa11.72□□□□□ -0.53
DDB1-215ENST00000539712 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
DDB1-215ENST00000539712 WFDC1Q9HC57 220 aa11.72□□□□□ -0.53
DDB1-215ENST00000539712 FUT9Q9Y231 359 aa11.72□□□□□ -0.53
DDB1-215ENST00000539712 IGKV2-40A0A087WW87 121 aaPredicted RBP11.71□□□□□ -0.53
DDB1-215ENST00000539712 C7orf71A4D174 169 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 IGKV2D-40P01614 121 aaPredicted RBP11.71□□□□□ -0.53
DDB1-215ENST00000539712 OR10J4P0C629 311 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 HOXA5P20719 270 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 RPL12P30050 165 aaKnown RBP11.71□□□□□ -0.53
DDB1-215ENST00000539712 BTN1A1Q13410 526 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 PRR9Q5T870 116 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 Q6ZQT7 251 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 CCDC28AQ8IWP9 274 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 ZFAND2AQ8N6M9 145 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 C11orf72Q8NBR9 251 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 RNF141Q8WVD5 230 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 PHYHIPLQ96FC7 376 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 PAXXQ9BUH6 204 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.53
DDB1-215ENST00000539712 BATF3Q9NR55 127 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 MBD2Q9UBB5 411 aa11.71□□□□□ -0.53
DDB1-215ENST00000539712 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
DDB1-215ENST00000539712 FAM122CQ6P4D5 195 aa11.7□□□□□ -0.54
DDB1-215ENST00000539712 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
DDB1-215ENST00000539712 SMIM3Q9BZL3 60 aa11.7□□□□□ -0.54
DDB1-215ENST00000539712 AAMDCQ9H7C9 122 aa11.7□□□□□ -0.54
DDB1-215ENST00000539712 KCNIP2Q9NS61 270 aa11.7□□□□□ -0.54
DDB1-215ENST00000539712 GAGE12BA1L429 117 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 GAGE7O76087 117 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 NUDT3O95989 172 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 NMBP08949 121 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 GAGE12FP0CL80 117 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 GAGE12GP0CL81 117 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 GAGE12IP0CL82 117 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
DDB1-215ENST00000539712 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
DDB1-215ENST00000539712 Q6ZTI0 123 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 ZNRF2Q8NHG8 242 aa11.69□□□□□ -0.54
DDB1-215ENST00000539712 C17orf112F2Z3M2 114 aa11.68□□□□□ -0.54
DDB1-215ENST00000539712 EIF3GO75821 320 aaKnown RBP eCLIP11.68□□□□□ -0.54
DDB1-215ENST00000539712 PET100P0DJ07 73 aa11.68□□□□□ -0.54
DDB1-215ENST00000539712 FFAR4Q5NUL3 377 aa11.68□□□□□ -0.54
DDB1-215ENST00000539712 GSN-AS1Q9NRJ2 163 aa11.68□□□□□ -0.54
DDB1-215ENST00000539712 ZNF492Q9P255 531 aa11.68□□□□□ -0.54
DDB1-215ENST00000539712 LINC00588Q9Y4M8 146 aa11.68□□□□□ -0.54
DDB1-215ENST00000539712 ALG5Q9Y673 324 aa11.68□□□□□ -0.54
DDB1-215ENST00000539712 TRAV26-1A0A087WT03 109 aa11.67□□□□□ -0.54
DDB1-215ENST00000539712 SNURFLB1AK76 121 aa11.67□□□□□ -0.54
DDB1-215ENST00000539712 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
DDB1-215ENST00000539712 ANXA2RQ3ZCQ2 193 aa11.67□□□□□ -0.54
DDB1-215ENST00000539712 OR7C2O60412 319 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 GPX1P07203 203 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 OR5I1Q13606 314 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 TMEM78Q5T7P6 136 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 EIF4E3Q8N5X7 224 aaKnown RBP11.66□□□□□ -0.54
DDB1-215ENST00000539712 Q8TAT8 98 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 C18orf15Q96N68 181 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 ATG101Q9BSB4 218 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 TMPRSS5Q9H3S3 457 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 TP53TG3Q9ULZ0 132 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 KLF12Q9Y4X4 402 aa11.66□□□□□ -0.54
DDB1-215ENST00000539712 IFNA5P01569 189 aa11.65□□□□□ -0.54
DDB1-215ENST00000539712 M6PRP20645 277 aa11.65□□□□□ -0.54
DDB1-215ENST00000539712 ZNF138P52744 262 aa11.65□□□□□ -0.54
DDB1-215ENST00000539712 LYPD1Q8N2G4 141 aa11.65□□□□□ -0.54
DDB1-215ENST00000539712 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
DDB1-215ENST00000539712 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
DDB1-215ENST00000539712 Q9H3A6 140 aa11.65□□□□□ -0.54
DDB1-215ENST00000539712 TRBV7-9A0A0J9YWB2 115 aa11.64□□□□□ -0.55
DDB1-215ENST00000539712 A0A0J9YY99 117 aa11.64□□□□□ -0.55
DDB1-215ENST00000539712 UBE2L3P68036 154 aaKnown RBP11.64□□□□□ -0.55
DDB1-215ENST00000539712 ZNF680Q8NEM1 530 aa11.64□□□□□ -0.55
DDB1-215ENST00000539712 GNPNAT1Q96EK6 184 aaPredicted RBP11.64□□□□□ -0.55
DDB1-215ENST00000539712 PCLOQ9Y6V0 5065 aa11.64□□□□□ -0.55
DDB1-215ENST00000539712 RYR1P21817 5038 aa11.64□□□□□ -0.55
DDB1-215ENST00000539712 MUC4Q99102 2169 aa11.64□□□□□ -0.55
DDB1-215ENST00000539712 LRP1BQ9NZR2 4599 aa11.64□□□□□ -0.55
DDB1-215ENST00000539712 NBDYA0A0U1RRE5 68 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 RBAKDNA6NC62 111 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 SPINK4O60575 86 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 CCL18P55774 89 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 TCL1AP56279 114 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 Q5BKY6 102 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 C1orf134Q5TEV5 83 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 SSX7Q7RTT5 188 aa11.63□□□□□ -0.55
DDB1-215ENST00000539712 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms