RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 RNF152Q8N8N0 203 aa7.8□□□□□ -1.16
SPARC-209ENST00000539687 GTSF1Q8WW33 167 aa7.8□□□□□ -1.16
SPARC-209ENST00000539687 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
SPARC-209ENST00000539687 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
SPARC-209ENST00000539687 WNK2Q9Y3S1 2297 aa7.8□□□□□ -1.16
SPARC-209ENST00000539687 LGALS9O00182 355 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 HOXA3O43365 443 aaPredicted RBP7.79□□□□□ -1.16
SPARC-209ENST00000539687 SH2D1AO60880 128 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 IGHV3-11P01762 117 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 LGALS1P09382 135 aaKnown RBP7.79□□□□□ -1.16
SPARC-209ENST00000539687 RAB4AP20338 218 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 SRIP30626 198 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 CAMPP49913 170 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 IQCJQ1A5X6 159 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 REC114Q7Z4M0 266 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 MAPK1IP1LQ8NDC0 245 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 OR10J6PQ8NGY7 276 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 KCNS1Q96KK3 526 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 UBE2E2Q96LR5 201 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 LINC00477Q96M19 166 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 SAMD10Q9BYL1 202 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 ABCA2Q9BZC7 2435 aa7.79□□□□□ -1.16
SPARC-209ENST00000539687 IGHV3OR16-8A0A075B7F1 116 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 TRAV8-2A0A0B4J237 113 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 GRIFINA4D1Z8 144 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 F2Z2F3 143 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 M0QZ24 198 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 APOHP02749 345 aaPredicted RBP7.78□□□□□ -1.16
SPARC-209ENST00000539687 PYY3Q5JQD4 70 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 UNQ9165/PRO28630Q6UXU0 137 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 SIGLECL1Q8N7X8 197 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 ZNF738Q8NE65 137 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 MYOZ3Q8TDC0 251 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 WFDC12Q8WWY7 111 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 C8orf49Q96NF6 230 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 ZNF702PQ9H963 129 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 SMPXQ9UHP9 88 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 CSMD1Q96PZ7 3565 aa7.78□□□□□ -1.16
SPARC-209ENST00000539687 IGHV3-66A0A0C4DH42 116 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 ZNF207O43670 478 aaKnown RBP7.77□□□□□ -1.17
SPARC-209ENST00000539687 SERF1AO75920 110 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 CTRLP40313 264 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 CRIP1P50238 77 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 SLAQ13239 276 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 Q6ZS46 218 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 VGLL1Q99990 258 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 RHPN1-AS1Q9BWJ2 59 aa7.77□□□□□ -1.17
SPARC-209ENST00000539687 CELSR1Q9NYQ6 3014 aa7.76□□□□□ -1.17
SPARC-209ENST00000539687 PRRC2AP48634 2157 aaKnown RBP7.76□□□□□ -1.17
SPARC-209ENST00000539687 SOCS3O14543 225 aa7.76□□□□□ -1.17
SPARC-209ENST00000539687 TRBV12-3P01733 135 aa7.76□□□□□ -1.17
SPARC-209ENST00000539687 PMCHP20382 165 aa7.76□□□□□ -1.17
SPARC-209ENST00000539687 RPL11P62913 178 aaKnown RBP7.76□□□□□ -1.17
SPARC-209ENST00000539687 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
SPARC-209ENST00000539687 ZNF493Q6ZR52 646 aa7.76□□□□□ -1.17
SPARC-209ENST00000539687 IL17RELQ6ZVW7 336 aa7.76□□□□□ -1.17
SPARC-209ENST00000539687 FER1L6-AS1Q8NA97 138 aa7.76□□□□□ -1.17
SPARC-209ENST00000539687 CHCHD1Q96BP2 118 aaKnown RBP7.76□□□□□ -1.17
SPARC-209ENST00000539687 ALKBH7Q9BT30 221 aaPredicted RBP7.76□□□□□ -1.17
SPARC-209ENST00000539687 IGHV3OR16-13A0A075B7E8 117 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 LOC102724200A0A096LPH7 203 aaPredicted RBP7.75□□□□□ -1.17
SPARC-209ENST00000539687 IGHV3-49A0A0A0MS15 119 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 IGHV3-74A0A0B4J1X5 117 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 ZNF705FA8MVS1 300 aaPredicted RBP7.75□□□□□ -1.17
SPARC-209ENST00000539687 TSTD3H0UI37 97 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 SMAD7O15105 426 aaKnown RBP7.75□□□□□ -1.17
SPARC-209ENST00000539687 CD5LO43866 347 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 HSBP1O75506 76 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 GPX1P07203 203 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 HLA-DMBP28068 263 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 TMEM256Q8N2U0 113 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 RNF182Q8N6D2 247 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 Q8TAT8 98 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 C18orf32Q8TCD1 76 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 AGPAT4-IT1Q9H0P7 198 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 DCHS2Q6V1P9 2916 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 ITPR3Q14573 2671 aa7.75□□□□□ -1.17
SPARC-209ENST00000539687 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.74□□□□□ -1.17
SPARC-209ENST00000539687 F8P00451 2351 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 PCP4L1A6NKN8 68 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 ZNF324O75467 553 aaPredicted RBP7.74□□□□□ -1.17
SPARC-209ENST00000539687 ORM1P02763 201 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 FRMD6-AS1P0C7T7 363 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 GZMBP10144 247 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 AMTP48728 403 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 CACNG7P62955 275 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 TMEM95Q3KNT9 176 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 GDF5OSQ5U4N7 250 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 IGFL4Q6B9Z1 124 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 SMIM15Q7Z3B0 74 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 WFDC11Q8NEX6 87 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 ODF3Q96PU9 254 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 CNFNQ9BYD5 112 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 TMEM160Q9NX00 188 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 PEMTQ9UBM1 199 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 TP53TG3Q9ULZ0 132 aa7.74□□□□□ -1.17
SPARC-209ENST00000539687 POLQO75417 2590 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms