RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ARF6P62330 175 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 ZNF846Q147U1 533 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 STX12Q86Y82 276 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 OR6V1Q8N148 313 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 CEP19Q96LK0 163 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 TLNRD1Q9H1K6 362 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 KNTC1P50748 2209 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 FAAHO00519 579 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 IGKV1-5P01602 117 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 G0S2P27469 103 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 SERPINB9P50453 376 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 SPANXN5Q5MJ07 72 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 HACD4Q5VWC8 232 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 OR5A1Q8NGJ0 315 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 PFN4Q8NHR9 129 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 AQP3Q92482 292 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 CCDC90BQ9GZT6 254 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 FBXO5Q9UKT4 447 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 ANK3Q12955 4377 aaKnown RBP1.91□□□□□ -2.1
TRAV11-201ENST00000539512 RYR2Q92736 4967 aa1.91□□□□□ -2.1
TRAV11-201ENST00000539512 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.9□□□□□ -2.1
TRAV11-201ENST00000539512 MYH1P12882 1939 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 A0A087WUJ7 227 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 EXOC1LA0A1B0GW35 172 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 TLCD2A6NGC4 264 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 OR4C46A6NHA9 309 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 GNG10P50151 68 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.9□□□□□ -2.11
TRAV11-201ENST00000539512 PHF13Q86YI8 300 aaPredicted RBP1.9□□□□□ -2.11
TRAV11-201ENST00000539512 OR4C6Q8NH72 309 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 H1FXQ92522 213 aaKnown RBP1.9□□□□□ -2.11
TRAV11-201ENST00000539512 PHB2Q99623 299 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 CMSS1Q9BQ75 279 aaKnown RBP1.9□□□□□ -2.11
TRAV11-201ENST00000539512 SELENOSQ9BQE4 189 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 LRTM1Q9HBL6 345 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 ATPIF1Q9UII2 106 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 STOML2Q9UJZ1 356 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 PRELID3BQ9Y3B1 194 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 U3KQA8 63 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 HERC2O95714 4834 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 NAV1Q8NEY1 1877 aa1.9□□□□□ -2.11
TRAV11-201ENST00000539512 PQLC2LA1A4F0 135 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 PIRO00625 290 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 TCL1BO95988 128 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 CLPSP04118 112 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 CCL4P13236 92 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 S100A4P26447 101 aaKnown RBP1.89□□□□□ -2.11
TRAV11-201ENST00000539512 BRS3P32247 399 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 EDDM3AQ14507 147 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 ESPL1Q14674 2120 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 DEFB133Q30KQ1 61 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 TMEM97Q5BJF2 176 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 ZNF826PQ6ZT77 177 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 PXT1Q8NFP0 134 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 AP3S1Q92572 193 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 SIGMAR1Q99720 223 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 DCSTAMPQ9H295 470 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 MRPL40Q9NQ50 206 aaKnown RBP1.89□□□□□ -2.11
TRAV11-201ENST00000539512 TENM3Q9P273 2699 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 FOCADQ5VW36 1801 aa1.89□□□□□ -2.11
TRAV11-201ENST00000539512 ABCA4P78363 2273 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 PLIN4Q96Q06 1357 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 SONP18583 2426 aaKnown RBP1.88□□□□□ -2.11
TRAV11-201ENST00000539512 SPI1P17947 270 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 FKBP2P26885 142 aaKnown RBP1.88□□□□□ -2.11
TRAV11-201ENST00000539512 DEFA1P59665 94 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 B2MP61769 119 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 EIF3IQ13347 325 aaKnown RBP1.88□□□□□ -2.11
TRAV11-201ENST00000539512 OOSP2Q86WS3 158 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 HIST3H2BBQ8N257 126 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 OR10X1Q8NGY0 326 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 MRPL57Q9BQC6 102 aaKnown RBP1.88□□□□□ -2.11
TRAV11-201ENST00000539512 TMEM147Q9BVK8 224 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 BOLA2Q9H3K6 86 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 MRPL27Q9P0M9 148 aaKnown RBP1.88□□□□□ -2.11
TRAV11-201ENST00000539512 ERGIC3Q9Y282 383 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 ARL5AQ9Y689 179 aa1.88□□□□□ -2.11
TRAV11-201ENST00000539512 TNRC6BQ9UPQ9 1833 aaKnown RBP1.88□□□□□ -2.11
TRAV11-201ENST00000539512 PI4KAP42356 2102 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 TMEM238C9JI98 176 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 E5RI56 91 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 HCRTO43612 131 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 HAND1O96004 215 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 CST2P09228 141 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 ASAH2BP0C7U1 165 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 CRYGAP11844 174 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 DEFB113Q30KQ7 82 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 LIN52Q52LA3 116 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 TEX36Q5VZQ5 186 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 Q6ZQT0 140 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 TRAPPC6BQ86SZ2 158 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 ST6GALNAC3Q8NDV1 305 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 KNL1Q8NG31 2342 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 TERB2Q8NHR7 220 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 BORCS7Q96B45 105 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 RMND5BQ96G75 393 aaPredicted RBP1.87□□□□□ -2.11
TRAV11-201ENST00000539512 BTF3L4Q96K17 158 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
TRAV11-201ENST00000539512 TP73-AS1Q9UF72 201 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms