RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
RPAIN-206ENST00000539417 LYSTQ99698 3801 aa11.33□□□□□ -0.6
RPAIN-206ENST00000539417 PGPA6NDG6 321 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 AKR1C8PQ5T2L2 129 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
RPAIN-206ENST00000539417 INSP01308 110 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 IFNA7P01567 189 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 AZU1P20160 251 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 CDKN1BP46527 198 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 GNG5P63218 68 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 GFI1BQ5VTD9 330 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 TEX261Q6UWH6 196 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 LYPD1Q8N2G4 141 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 Q8TAT8 98 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 NEU1Q99519 415 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
RPAIN-206ENST00000539417 RYR3Q15413 4870 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 AMBPP02760 352 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 PRR9Q5T870 116 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 Q6ZQT7 251 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 SLC7A5P1Q8MH63 180 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
RPAIN-206ENST00000539417 CXorf1O96002 111 aa11.3□□□□□ -0.6
RPAIN-206ENST00000539417 EMP1P54849 157 aa11.3□□□□□ -0.6
RPAIN-206ENST00000539417 ZNF680Q8NEM1 530 aa11.3□□□□□ -0.6
RPAIN-206ENST00000539417 C11orf45Q8TAV5 145 aa11.3□□□□□ -0.6
RPAIN-206ENST00000539417 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
RPAIN-206ENST00000539417 TMEM208Q9BTX3 173 aa11.3□□□□□ -0.6
RPAIN-206ENST00000539417 GGTLC3B5MD39 225 aa11.29□□□□□ -0.6
RPAIN-206ENST00000539417 SEC11BP0C7V7 166 aa11.29□□□□□ -0.6
RPAIN-206ENST00000539417 BTN1A1Q13410 526 aa11.29□□□□□ -0.6
RPAIN-206ENST00000539417 IQCF2Q8IXL9 164 aa11.29□□□□□ -0.6
RPAIN-206ENST00000539417 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
RPAIN-206ENST00000539417 ODF3Q96PU9 254 aa11.29□□□□□ -0.6
RPAIN-206ENST00000539417 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 STOML3Q8TAV4 291 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 LINC01587Q99440 93 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 ZNF492Q9P255 531 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
RPAIN-206ENST00000539417 RYR2Q92736 4967 aa11.28□□□□□ -0.6
RPAIN-206ENST00000539417 TRAV8-1A0A0A6YYK1 113 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 PLAC8L1A1L4L8 177 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 KLLNB2CW77 178 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 HBE1P02100 147 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 HTN1P15515 57 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 LEPP41159 167 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 CSN1S1P47710 185 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 UBE2G2P60604 165 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 RRN3P1Q2M238 152 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 SGK494Q96LW2 274 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.6
RPAIN-206ENST00000539417 ALMS1Q8TCU4 4167 aa11.27□□□□□ -0.61
RPAIN-206ENST00000539417 HYDINQ4G0P3 5121 aa11.26□□□□□ -0.61
RPAIN-206ENST00000539417 SLC25A5P05141 298 aaKnown RBP11.26□□□□□ -0.61
RPAIN-206ENST00000539417 TPT1P13693 172 aaKnown RBP11.26□□□□□ -0.61
RPAIN-206ENST00000539417 CRISP2P16562 243 aa11.26□□□□□ -0.61
RPAIN-206ENST00000539417 TSPOP30536 169 aa11.26□□□□□ -0.61
RPAIN-206ENST00000539417 ZNF138P52744 262 aa11.26□□□□□ -0.61
RPAIN-206ENST00000539417 C12orf74Q32Q52 190 aa11.26□□□□□ -0.61
RPAIN-206ENST00000539417 FAM213BQ8TBF2 198 aa11.26□□□□□ -0.61
RPAIN-206ENST00000539417 TVP23CQ96ET8 276 aa11.26□□□□□ -0.61
RPAIN-206ENST00000539417 A0A1B0GV50 99 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-206ENST00000539417 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
RPAIN-206ENST00000539417 RAB14P61106 215 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 SUMO1P63165 101 aaKnown RBP11.25□□□□□ -0.61
RPAIN-206ENST00000539417 Q6ZTC4 211 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 CMTM2Q8TAZ6 248 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 RXFP4Q8TDU9 374 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-206ENST00000539417 C7orf71A4D174 169 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
RPAIN-206ENST00000539417 FAM74A7A6NL05 159 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 TCRAP04437 139 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 TAS2R60P59551 318 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 CLLU1Q5K131 121 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 CEMP1Q6PRD7 247 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-206ENST00000539417 SLC51BQ86UW2 128 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
RPAIN-206ENST00000539417 A0A1W2PRE2 83 aa11.23□□□□□ -0.61
RPAIN-206ENST00000539417 LINC00862A6NCI5 91 aa11.23□□□□□ -0.61
RPAIN-206ENST00000539417 UMAD1C9J7I0 102 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms