RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 NUDT3O95989 172 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 IFNA5P01569 189 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 IGKV2D-40P01614 121 aaPredicted RBP10.51□□□□□ -0.73
RAB40B-202ENST00000538809 OR10J4P0C629 311 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 ICAM4Q14773 271 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 RNF141Q8WVD5 230 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 PHYHIPLQ96FC7 376 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 AGPAT4-IT1Q9H0P7 198 aa10.51□□□□□ -0.73
RAB40B-202ENST00000538809 CBY3A6NI87 242 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 CRISP2P16562 243 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 BTN1A1Q13410 526 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 LGALS9BQ3B8N2 356 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 RNF212Q495C1 297 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 FAM122CQ6P4D5 195 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 LINC00336Q6ZUF6 198 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 CCDC28AQ8IWP9 274 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 LINC00612Q8N6U2 182 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 SCGB1C1Q8TD33 95 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 LINC00477Q96M19 166 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 MED28Q9H204 178 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 AAMDCQ9H7C9 122 aa10.5□□□□□ -0.73
RAB40B-202ENST00000538809 PKHD1P08F94 4074 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 GAGE12BA1L429 117 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 C7orf71A4D174 169 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 SNURFLB1AK76 121 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 OR7C2O60412 319 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 GAGE7O76087 117 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 SLC25A5P05141 298 aaKnown RBP10.49□□□□□ -0.73
RAB40B-202ENST00000538809 GAGE12FP0CL80 117 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 GAGE12GP0CL81 117 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 GAGE12IP0CL82 117 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 Q5BKY6 102 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 AQP10Q96PS8 301 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 ATG101Q9BSB4 218 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 MUC4Q99102 2169 aa10.49□□□□□ -0.73
RAB40B-202ENST00000538809 HERC2O95714 4834 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
RAB40B-202ENST00000538809 CD300CQ08708 224 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 Q6ZR54 194 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 LYPD1Q8N2G4 141 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 ZFAND2AQ8N6M9 145 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 VGLL1Q99990 258 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 PYGO2Q9BRQ0 406 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
RAB40B-202ENST00000538809 A0A1B0GVY2 172 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 EIF3GO75821 320 aaKnown RBP eCLIP10.47□□□□□ -0.73
RAB40B-202ENST00000538809 NMBP08949 121 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 GIPP09681 153 aaPredicted RBP10.47□□□□□ -0.73
RAB40B-202ENST00000538809 M6PRP20645 277 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 RNASE4P34096 147 aaKnown RBP10.47□□□□□ -0.73
RAB40B-202ENST00000538809 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
RAB40B-202ENST00000538809 KHDC3LQ587J8 217 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 PRR9Q5T870 116 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 ASB13Q8WXK3 278 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 Q9H3A6 140 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 ZNF492Q9P255 531 aa10.47□□□□□ -0.73
RAB40B-202ENST00000538809 TAS2R45P59539 299 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 RAB2AP61019 212 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 OR5I1Q13606 314 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 ACOT6Q3I5F7 207 aaPredicted RBP10.46□□□□□ -0.73
RAB40B-202ENST00000538809 TMEM78Q5T7P6 136 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 Q6ZTI0 123 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 Q8TAT8 98 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 TMPRSS5Q9H3S3 457 aa10.46□□□□□ -0.73
RAB40B-202ENST00000538809 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 A0A0J9YY99 117 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 RNF222A6NCQ9 220 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 HOXA5P20719 270 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 RANP62826 216 aaKnown RBP10.45□□□□□ -0.74
RAB40B-202ENST00000538809 Q6ZQT7 251 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 C11orf72Q8NBR9 251 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 GSN-AS1Q9NRJ2 163 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 PKD1P98161 4303 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 KIAA1109Q2LD37 5005 aa10.45□□□□□ -0.74
RAB40B-202ENST00000538809 TRAV26-1A0A087WT03 109 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 G3V3Q6 166 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 GPX1P07203 203 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 ZNF138P52744 262 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 FAM3BP58499 235 aaPredicted RBP10.44□□□□□ -0.74
RAB40B-202ENST00000538809 DAZ2Q13117 558 aaKnown RBP10.44□□□□□ -0.74
RAB40B-202ENST00000538809 ZNF266Q14584 549 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 ANXA2RQ3ZCQ2 193 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 PQLC2Q6ZP29 291 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 EIF4E3Q8N5X7 224 aaKnown RBP10.44□□□□□ -0.74
RAB40B-202ENST00000538809 GNPNAT1Q96EK6 184 aaPredicted RBP10.44□□□□□ -0.74
RAB40B-202ENST00000538809 PSMG3Q9BT73 122 aaPredicted RBP10.44□□□□□ -0.74
RAB40B-202ENST00000538809 LINC00588Q9Y4M8 146 aa10.44□□□□□ -0.74
RAB40B-202ENST00000538809 DIRC3C9JPN6 131 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 RGS21Q2M5E4 152 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 HSD17B11Q8NBQ5 300 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 ZNF680Q8NEM1 530 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 OR10G4Q8NGN3 311 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 OR10G9Q8NGN4 311 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 OR10G7Q8NGN6 311 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms