RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 KIAA2026Q5HYC2 2103 aa13.43□□□□□ -0.26
SCARB1-205ENST00000538291 SBF1O95248 1867 aa13.43□□□□□ -0.26
SCARB1-205ENST00000538291 THAP8Q8NA92 274 aa13.43□□□□□ -0.26
SCARB1-205ENST00000538291 A0A087X0K7 114 aa13.43□□□□□ -0.26
SCARB1-205ENST00000538291 PRSS33Q8NF86 280 aa13.43□□□□□ -0.26
SCARB1-205ENST00000538291 FANCMQ8IYD8 2048 aa13.42□□□□□ -0.26
SCARB1-205ENST00000538291 PIP4P1Q86T03 277 aa13.42□□□□□ -0.26
SCARB1-205ENST00000538291 CT83Q5H943 113 aa13.42□□□□□ -0.26
SCARB1-205ENST00000538291 TRAV12-2A0A075B6T6 113 aa13.42□□□□□ -0.26
SCARB1-205ENST00000538291 GAGE6Q13070 117 aa13.42□□□□□ -0.26
SCARB1-205ENST00000538291 WDR86Q86TI4 376 aa13.42□□□□□ -0.26
SCARB1-205ENST00000538291 ZNF114Q8NC26 417 aa13.42□□□□□ -0.26
SCARB1-205ENST00000538291 LOC105371267A0A1B0GV96 52 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 PFN2P35080 140 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 ANXA2RQ3ZCQ2 193 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 SDHAF1A6NFY7 115 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 FAM104BQ5XKR9 115 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 IGHV7-4-1A0A0J9YVY3 117 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 Q8N8P6 123 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 H3BRN7 92 aa13.41□□□□□ -0.26
SCARB1-205ENST00000538291 OCIAD2Q56VL3 154 aa13.4□□□□□ -0.26
SCARB1-205ENST00000538291 H3BUA1 57 aa13.4□□□□□ -0.26
SCARB1-205ENST00000538291 CFPP27918 469 aa13.4□□□□□ -0.26
SCARB1-205ENST00000538291 LURAP1LQ8IV03 231 aa13.4□□□□□ -0.26
SCARB1-205ENST00000538291 SLAQ13239 276 aa13.4□□□□□ -0.26
SCARB1-205ENST00000538291 PRR25Q96S07 402 aa13.4□□□□□ -0.26
SCARB1-205ENST00000538291 KAAG1Q9UBP8 84 aa13.4□□□□□ -0.26
SCARB1-205ENST00000538291 TMEM14CQ9P0S9 112 aa13.39□□□□□ -0.27
SCARB1-205ENST00000538291 TSSC4Q9Y5U2 329 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-205ENST00000538291 THSD7BQ9C0I4 1608 aa13.39□□□□□ -0.27
SCARB1-205ENST00000538291 KLF5Q13887 457 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-205ENST00000538291 VPREB3Q9UKI3 123 aa13.39□□□□□ -0.27
SCARB1-205ENST00000538291 MPV17L2Q567V2 206 aa13.39□□□□□ -0.27
SCARB1-205ENST00000538291 IGHV3-38A0A0C4DH36 116 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 WT1-ASQ06250 92 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 GAGE2AQ6NT46 116 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 ZNF503-AS2A6NEH8 195 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 KIR3DS1Q14943 382 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 ZFAND6Q6FIF0 208 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 TPSG1Q9NRR2 321 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.38□□□□□ -0.27
SCARB1-205ENST00000538291 HLA-DRB4P13762 266 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 FAM120AOSQ5T036 256 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 IGF2BP2-AS1Q96M15 143 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 HLA-DRB4X5D2U9 266 aa13.38□□□□□ -0.27
SCARB1-205ENST00000538291 DEFB112Q30KQ8 113 aa13.37□□□□□ -0.27
SCARB1-205ENST00000538291 ATP6V0BQ99437 205 aa13.37□□□□□ -0.27
SCARB1-205ENST00000538291 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■■■□□ 14.7
SCARB1-205ENST00000538291 HOXD3P31249 432 aaPredicted RBP13.37□□□□□ -0.27
SCARB1-205ENST00000538291 H3BMM0 161 aa13.37□□□□□ -0.27
SCARB1-205ENST00000538291 C15orf65H3BRN8 121 aa13.37□□□□□ -0.27
SCARB1-205ENST00000538291 IGHV2-5P01817 119 aa13.37□□□□□ -0.27
SCARB1-205ENST00000538291 PHF3Q92576 2039 aaKnown RBP13.37□□□□□ -0.27
SCARB1-205ENST00000538291 GBF1Q92538 1859 aa13.36□□□□□ -0.27
SCARB1-205ENST00000538291 NXPH4O95158 308 aa13.36□□□□□ -0.27
SCARB1-205ENST00000538291 ANGP03950 147 aaKnown RBP13.36□□□□□ -0.27
SCARB1-205ENST00000538291 RBMY1FQ15415 496 aaKnown RBP13.35□□□□□ -0.27
SCARB1-205ENST00000538291 STPG4Q8N801 248 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 EDA2RQ9HAV5 297 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 MMP23AO75900 390 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 COL4A6Q14031 1691 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 C9JAW5 83 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 ZSWIM8A7E2V4 1837 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 A0A096LPF7 62 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 IGHV4-59P01825 116 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 ZNF134P52741 427 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 SRSF2Q01130 221 aaKnown RBP13.35□□□□□ -0.27
SCARB1-205ENST00000538291 Q0VG73 95 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 DEFB113Q30KQ7 82 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 SLX1AQ9BQ83 275 aa13.35□□□□□ -0.27
SCARB1-205ENST00000538291 PRSS29PA6NIE9 313 aa13.34□□□□□ -0.27
SCARB1-205ENST00000538291 SOCS3O14543 225 aa13.34□□□□□ -0.27
SCARB1-205ENST00000538291 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
SCARB1-205ENST00000538291 YLPM1P49750 1951 aaKnown RBP13.34□□□□□ -0.27
SCARB1-205ENST00000538291 IGLC1P0CG04 106 aa13.34□□□□□ -0.27
SCARB1-205ENST00000538291 DIAPH2-AS1Q14236 149 aa13.34□□□□□ -0.27
SCARB1-205ENST00000538291 ZNF407Q9C0G0 2248 aa13.33□□□□□ -0.27
SCARB1-205ENST00000538291 C22orf46C9J442 243 aa13.33□□□□□ -0.27
SCARB1-205ENST00000538291 LHBP01229 141 aa13.33□□□□□ -0.27
SCARB1-205ENST00000538291 C1orf147Q96MC9 270 aaPredicted RBP13.33□□□□□ -0.27
SCARB1-205ENST00000538291 CCL24O00175 119 aa13.33□□□□□ -0.28
SCARB1-205ENST00000538291 RHOHQ15669 191 aa13.33□□□□□ -0.28
SCARB1-205ENST00000538291 MRPL51Q4U2R6 128 aaKnown RBP13.33□□□□□ -0.28
SCARB1-205ENST00000538291 SHISA9B4DS77 424 aa13.33□□□□□ -0.28
SCARB1-205ENST00000538291 HOXB4P17483 251 aaPredicted RBP13.33□□□□□ -0.28
SCARB1-205ENST00000538291 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
SCARB1-205ENST00000538291 TCF20Q9UGU0 1960 aaKnown RBP13.33□□□□□ -0.28
SCARB1-205ENST00000538291 NDUFS7O75251 213 aa13.33□□□□□ -0.28
SCARB1-205ENST00000538291 C18orf32Q8TCD1 76 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 TP53BP1Q12888 1972 aaPredicted RBP13.32□□□□□ -0.28
SCARB1-205ENST00000538291 TRAV26-2A0A0B4J265 109 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 PRSS57Q6UWY2 283 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 IGHV1-24A0A0C4DH33 117 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 IGKV1-39P01597 117 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 IGKV1D-39P04432 117 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 IGHV2-70P01814 119 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 DOCK8Q8NF50 2099 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 INAFM2P0DMQ5 153 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 FAM231DQ6ZW35 169 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms