RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PAX2Q02962 417 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 C1orf194Q5T5A4 169 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 CHCHD1Q96BP2 118 aaKnown RBP4.24□□□□□ -1.73
LRP6-203ENST00000538239 ZNF106Q9H2Y7 1883 aaKnown RBP4.24□□□□□ -1.73
LRP6-203ENST00000538239 TRAV9-2A0A087WT02 112 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 TYMSP04818 313 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 PFN1P07737 140 aaKnown RBP4.23□□□□□ -1.73
LRP6-203ENST00000538239 MORN3Q6PF18 240 aaPredicted RBP4.23□□□□□ -1.73
LRP6-203ENST00000538239 PARD6GQ9BYG4 376 aaPredicted RBP4.23□□□□□ -1.73
LRP6-203ENST00000538239 A8MXK9 166 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 LINC01551Q86U37 167 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 KMT2EQ8IZD2 1858 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 TMEM213A2RRL7 107 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 IGLV3-1P01715 115 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 VWC2Q2TAL6 325 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 INAFM1C9JVW0 142 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 TSPAN13O95857 204 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 OR2K2Q8NGT1 345 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 TMEM190Q8WZ59 177 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 CBY1Q9Y3M2 126 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 PCNX2A6NKB5 2137 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 IGHV4OR15-8A0A075B7B6 117 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 A0A087WW49 117 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 TRAV26-2A0A0B4J265 109 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 SPXQ9BT56 116 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 TMEM242Q9NWH2 141 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 PLNP26678 52 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 ASPHD1Q5U4P2 390 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 PIFOQ8TCI5 191 aa4.23□□□□□ -1.73
LRP6-203ENST00000538239 DNAJC9-AS1A6NH13 148 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 C5orf56Q8N8D9 126 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 WFDC11Q8NEX6 87 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 IGHV7-81A0A0B4J1V7 117 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 TRAV1-1A0A0B4J248 108 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 INS-IGF2F8WCM5 200 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 CXCL1P09341 107 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 RNF138Q8WVD3 245 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 C17orf77Q96MU5 243 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 SMPXQ9UHP9 88 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 A8MWV9 139 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 DDTP30046 118 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 THAP8Q8NA92 274 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 DLX4Q92988 240 aaPredicted RBP4.22□□□□□ -1.73
LRP6-203ENST00000538239 AJUBAQ96IF1 538 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 CITED2Q99967 270 aaPredicted RBP4.22□□□□□ -1.73
LRP6-203ENST00000538239 FOXI2Q6ZQN5 318 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 Q9HAA7 133 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
LRP6-203ENST00000538239 IGKV1OR2-108A0A075B7D4 117 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 RHODO00212 210 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 IGLC1P0CG04 106 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 CFPP27918 469 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 KRTAP27-1Q3LI81 207 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 C8orf31Q8N9H6 132 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 NPBQ8NG41 125 aa4.22□□□□□ -1.73
LRP6-203ENST00000538239 CDK2AP2O75956 126 aa4.21□□□□□ -1.73
LRP6-203ENST00000538239 NEGR1Q7Z3B1 354 aa4.21□□□□□ -1.73
LRP6-203ENST00000538239 GSN-AS1Q9NRJ2 163 aa4.21□□□□□ -1.73
LRP6-203ENST00000538239 I3L3M4 83 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 M0R2P5 195 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 ANGP03950 147 aaKnown RBP4.21□□□□□ -1.74
LRP6-203ENST00000538239 Q6ZQT7 251 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 TMEM243Q9BU79 118 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 ANAPC10Q9UM13 185 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 IGKV2D-24A0A075B6R9 120 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 TNFRSF6BO95407 300 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 IGLC7A0M8Q6 106 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 CLPSL1A2RUU4 121 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 VWC2LB2RUY7 222 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 LYL1P12980 280 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 Q8N7P7 452 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 RMI2Q96E14 147 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 DMRT1Q9Y5R6 373 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 U3KQE9 123 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 TNRC6AQ8NDV7 1962 aaKnown RBP4.21□□□□□ -1.74
LRP6-203ENST00000538239 IGHV4-31P0DP07 118 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 PLEKHB2Q96CS7 222 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 ZNF625Q96I27 306 aaPredicted RBP4.21□□□□□ -1.74
LRP6-203ENST00000538239 TP53TG1Q9Y2A0 90 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 SEC11AP67812 179 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 CYYR1Q96J86 154 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 ESM1Q9NQ30 184 aa4.21□□□□□ -1.74
LRP6-203ENST00000538239 LINC01549A6NIU2 74 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 RASL11AQ6T310 242 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 ZNF491Q8N8L2 437 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 Q8N9W7 124 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 ATP6V0BQ99437 205 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 TIMM21Q9BVV7 248 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 GNRH2O43555 120 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 PRIMA1Q86XR5 153 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 GTF3C1Q12789 2109 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 F8W735 103 aaPredicted RBP4.2□□□□□ -1.74
LRP6-203ENST00000538239 DEFB4AO15263 64 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 GHRHP01286 108 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 FBXL19-AS1Q494R0 122 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 PRR25Q96S07 402 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 A0A1B0GW64 132 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 LINC00587B1AMM8 73 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms