RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 PGPA6NDG6 321 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 H3BRN7 92 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 GNG7O60262 68 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 SLC25A5P05141 298 aaKnown RBP8.36□□□□□ -1.07
CLIP1-210ENST00000538120 ZNF138P52744 262 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 UBE2V1Q13404 147 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 C5orf56Q8N8D9 126 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 FAM110DQ8TAY7 271 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-210ENST00000538120 ZNF414Q96IQ9 312 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 MEGF9Q9H1U4 602 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 UBR5O95071 2799 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-210ENST00000538120 TRAV30A0A087WSZ9 112 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 OR4C46A6NHA9 309 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 MSMBP08118 114 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 HIST1H1EP10412 219 aaKnown RBP8.36□□□□□ -1.07
CLIP1-210ENST00000538120 SCGB1A1P11684 91 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 S100A7P31151 101 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 ID1P41134 155 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 PGLYRP4Q96LB8 373 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
CLIP1-210ENST00000538120 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 A1L4Q6 167 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 MRPS12O15235 138 aaKnown RBP8.35□□□□□ -1.07
CLIP1-210ENST00000538120 IL4P05112 153 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 MPV17L2Q567V2 206 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 TMEM219Q86XT9 240 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 VPS25Q9BRG1 176 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 ZFHX3Q15911 3703 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 G3V318 75 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 CTSGP08311 255 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 COX6B1P14854 86 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 FCGR2BP31994 310 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-210ENST00000538120 ECSCRQ19T08 205 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 Q9H3A6 140 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 THYN1Q9P016 225 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 KLF12Q9Y4X4 402 aa8.35□□□□□ -1.07
CLIP1-210ENST00000538120 FBN2P35556 2912 aa8.34□□□□□ -1.07
CLIP1-210ENST00000538120 A0A096LNT2 108 aa8.34□□□□□ -1.07
CLIP1-210ENST00000538120 HBBP68871 147 aa8.34□□□□□ -1.07
CLIP1-210ENST00000538120 C17orf77Q96MU5 243 aa8.34□□□□□ -1.07
CLIP1-210ENST00000538120 CHRDL1Q9BU40 450 aa8.34□□□□□ -1.07
CLIP1-210ENST00000538120 MLST8Q9BVC4 326 aa8.34□□□□□ -1.07
CLIP1-210ENST00000538120 TRAV8-1A0A0A6YYK1 113 aa8.34□□□□□ -1.08
CLIP1-210ENST00000538120 OR2T8A6NH00 312 aa8.34□□□□□ -1.08
CLIP1-210ENST00000538120 DSCR9P59020 149 aa8.34□□□□□ -1.08
CLIP1-210ENST00000538120 GPR82Q96P67 336 aa8.34□□□□□ -1.08
CLIP1-210ENST00000538120 RPP21Q9H633 154 aaKnown RBP8.34□□□□□ -1.08
CLIP1-210ENST00000538120 SYS1-DBNDD2H3BUS1 97 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 HERV-K104P63124 156 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 C19orf54Q5BKX5 351 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 C5orf17Q8NAS9 161 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 ZNF502Q8TBZ5 544 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 PMCHL2Q9BQD1 86 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 BEX4Q9NWD9 120 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-210ENST00000538120 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 TIMM8BQ9Y5J9 83 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-210ENST00000538120 SPG11Q96JI7 2443 aa8.33□□□□□ -1.08
CLIP1-210ENST00000538120 TRBV19A0A075B6N1 114 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 B4DSR2 109 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 TCRAP04437 139 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 FOXE3Q13461 319 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 Q6ZS46 218 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 BOD1L2Q8IYS8 172 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 PRSS22Q9GZN4 317 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 CRYBG3Q68DQ2 2970 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 LEPROTL1O95214 131 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 KRTAP10-9P60411 292 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 RHOGP84095 191 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 C15orf32Q32M92 178 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 BPIFA4PQ86YQ2 179 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
CLIP1-210ENST00000538120 C19orf71A6NCJ1 209 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 CRXO43186 299 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-210ENST00000538120 NUDT3O95989 172 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 P01737 135 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 SLC25A16P16260 332 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 VAMP3Q15836 100 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 CIARTQ8N365 385 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-210ENST00000538120 A6NDX4 124 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 LTAP01374 205 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 CSN3P07498 182 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 CRIP2P52943 208 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-210ENST00000538120 CRYBA4P53673 196 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 SIGLEC15Q6ZMC9 328 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 OR4C5Q8NGB2 326 aa8.31□□□□□ -1.08
CLIP1-210ENST00000538120 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 A8MWL6 223 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 IGLV2-11P01706 119 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 MUC21Q5SSG8 566 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 CCDC140Q96MF4 163 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 CELSR1Q9NYQ6 3014 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms