RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 RRN3P1Q2M238 152 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 LGALS9CQ6DKI2 356 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 FAM122CQ6P4D5 195 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 ZFAND2AQ8N6M9 145 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 OR11H4Q8NGC9 324 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 OR2T35Q8NGX2 323 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 OR10J6PQ8NGY7 276 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 OR2G3Q8NGZ4 309 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 SCGB1C1Q8TD33 95 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 RNASE8Q8TDE3 154 aaKnown RBP5.94□□□□□ -1.46
SPARC-208ENST00000538026 ODF3Q96PU9 254 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 LINC01587Q99440 93 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 NIPSNAP3BQ9BS92 247 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 TIMM9Q9Y5J7 89 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 IGHV4-4A0A075B6R2 117 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 TRAV12-3A0A0B4J271 114 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 TMEM189A5PLL7 270 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 CRISP2P16562 243 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 BTN1A1Q13410 526 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 ZNF726P1Q15940 193 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 HSD17B11Q8NBQ5 300 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 SUN5Q8TC36 379 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 ASB13Q8WXK3 278 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 TMEM208Q9BTX3 173 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 Q9H3A6 140 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 KCNIP2Q9NS61 270 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 PRELID1Q9Y255 219 aa5.93□□□□□ -1.46
SPARC-208ENST00000538026 FXYD6-FXYD2A0A087WZ82 144 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 DIRC3C9JPN6 131 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 H7BYZ3 331 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 OR7C2O60412 319 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 STAG3L2P0CL84 134 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 STAG3L3P0CL85 134 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 HTN1P15515 57 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 UBE2L3P68036 154 aaKnown RBP5.92□□□□□ -1.46
SPARC-208ENST00000538026 ACOT6Q3I5F7 207 aaPredicted RBP5.92□□□□□ -1.46
SPARC-208ENST00000538026 TMEM256Q8N2U0 113 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 C11orf72Q8NBR9 251 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 OR10G4Q8NGN3 311 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 OR10G7Q8NGN6 311 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 Q8TAT8 98 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 RAB24Q969Q5 203 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 TVP23CQ96ET8 276 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 LINC00477Q96M19 166 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 PSMG3Q9BT73 122 aaPredicted RBP5.92□□□□□ -1.46
SPARC-208ENST00000538026 ZNF492Q9P255 531 aa5.92□□□□□ -1.46
SPARC-208ENST00000538026 SLC25A5P05141 298 aaKnown RBP5.91□□□□□ -1.46
SPARC-208ENST00000538026 ARL14EPLP0DKL9 152 aa5.91□□□□□ -1.46
SPARC-208ENST00000538026 LYPD1Q8N2G4 141 aa5.91□□□□□ -1.46
SPARC-208ENST00000538026 C20orf144Q9BQM9 153 aa5.91□□□□□ -1.46
SPARC-208ENST00000538026 NOP10Q9NPE3 64 aaKnown RBP5.91□□□□□ -1.46
SPARC-208ENST00000538026 PPP1R14DQ9NXH3 145 aa5.91□□□□□ -1.46
SPARC-208ENST00000538026 TP53TG3Q9ULZ0 132 aa5.91□□□□□ -1.46
SPARC-208ENST00000538026 TRAV8-1A0A0A6YYK1 113 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 C7orf71A4D174 169 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 PGPA6NDG6 321 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 LYRM9A8MSI8 78 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 ARPC5O15511 151 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 NMBP08949 121 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 DEFB130BP0DP73 79 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 DEFB130AP0DP74 79 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 HTN3P15516 51 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 GCHFRP30047 84 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 RNASE4P34096 147 aaKnown RBP5.9□□□□□ -1.46
SPARC-208ENST00000538026 LEPP41159 167 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 ZNF138P52744 262 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 TCTAP57738 103 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 GNG5P63218 68 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 ZNF266Q14584 549 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 KHDC3LQ587J8 217 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 TMEM88Q6PEY1 159 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 INO80EQ8NBZ0 244 aaPredicted RBP5.9□□□□□ -1.46
SPARC-208ENST00000538026 TMEM263Q8WUH6 116 aaKnown RBP5.9□□□□□ -1.46
SPARC-208ENST00000538026 C16orf74Q96GX8 76 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 LINC00467Q9BRT7 94 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 AAMDCQ9H7C9 122 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 OTORQ9NRC9 128 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 FAT1Q14517 4588 aa5.9□□□□□ -1.46
SPARC-208ENST00000538026 A0A1W2PPV4 95 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 RBAKDNA6NC62 111 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 GGTLC3B5MD39 225 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 IGLV2-11P01706 119 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 HOXA5P20719 270 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 CDC34P49427 236 aaPredicted RBP5.89□□□□□ -1.47
SPARC-208ENST00000538026 TAS2R45P59539 299 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 DAD1P61803 113 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 SERF2P84101 59 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 PQLC2Q6ZP29 291 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 Q6ZTI0 123 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 KCNRGQ8N5I3 272 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 ST6GAL2Q96JF0 529 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 HYLS1Q96M11 299 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 PYGO2Q9BRQ0 406 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 TMPRSS5Q9H3S3 457 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 GSN-AS1Q9NRJ2 163 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 KLF12Q9Y4X4 402 aa5.89□□□□□ -1.47
SPARC-208ENST00000538026 TIMM8BQ9Y5J9 83 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms