RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 TAX1BP3O14907 124 aa11.08□□□□□ -0.64
USP44-203ENST00000537435 RNF182Q8N6D2 247 aa11.08□□□□□ -0.64
USP44-203ENST00000537435 SNAI2O43623 268 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 HBDP02042 147 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 SAA4P35542 130 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
USP44-203ENST00000537435 PAX8Q06710 450 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 ERASQ7Z444 233 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 PPP1R14DQ9NXH3 145 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 IGF2RP11717 2491 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 ATRXP46100 2492 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 G3V318 75 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 GOSR1O95249 250 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 RAB9AP51151 201 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 FOXE3Q13461 319 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 LGALS9CQ6DKI2 356 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 CLEC19AQ6UXS0 136 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 DEFB125Q8N687 156 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 CCDC140Q96MF4 163 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 UBTD1Q9HAC8 227 aa11.07□□□□□ -0.64
USP44-203ENST00000537435 IGHV3OR16-13A0A075B7E8 117 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 IGHV3-74A0A0B4J1X5 117 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 CACNG7P62955 275 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 NHLH1Q02575 133 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 VAMP3Q15836 100 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 ANKRD39Q53RE8 183 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 C2orf91Q6ZV80 131 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 RNF185Q96GF1 192 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 CLPSL1A2RUU4 121 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 IL17RELQ6ZVW7 336 aa11.06□□□□□ -0.64
USP44-203ENST00000537435 KLK9Q2XQG4 91 aa11.05□□□□□ -0.64
USP44-203ENST00000537435 PRSS57Q6UWY2 283 aa11.05□□□□□ -0.64
USP44-203ENST00000537435 CNFNQ9BYD5 112 aa11.05□□□□□ -0.64
USP44-203ENST00000537435 KLK9Q9UKQ9 250 aa11.05□□□□□ -0.64
USP44-203ENST00000537435 PPIFP30405 207 aaKnown RBP11.04□□□□□ -0.64
USP44-203ENST00000537435 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 IFI27L1Q96BM0 104 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 COL6A6A6NMZ7 2263 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 RBAKDNA6NC62 111 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 GAS8-AS1O95177 125 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 EFNA4P52798 201 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 DPF1Q92782 380 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
USP44-203ENST00000537435 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 CBY3A6NI87 242 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 ZNF207O43670 478 aaKnown RBP11.03□□□□□ -0.64
USP44-203ENST00000537435 FGF6P10767 208 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 EEF1AKMT3Q96AZ1 226 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 MAP1LC3AQ9H492 121 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 TCTAP57738 103 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 LMO4P61968 165 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 OR4C5Q8NGB2 326 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 SVEP1Q4LDE5 3571 aa11.03□□□□□ -0.64
USP44-203ENST00000537435 AGPAT4-IT1Q9H0P7 198 aa11.02□□□□□ -0.64
USP44-203ENST00000537435 IGKV3D-20A0A0C4DH25 116 aa11.02□□□□□ -0.65
USP44-203ENST00000537435 NPFFO15130 113 aa11.02□□□□□ -0.65
USP44-203ENST00000537435 CD5LO43866 347 aa11.02□□□□□ -0.65
USP44-203ENST00000537435 PPBPP02775 128 aa11.02□□□□□ -0.65
USP44-203ENST00000537435 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.65
USP44-203ENST00000537435 SPTBN1Q01082 2364 aaKnown RBP11.02□□□□□ -0.65
USP44-203ENST00000537435 CACNA1BQ00975 2339 aa11.02□□□□□ -0.65
USP44-203ENST00000537435 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 METTL26Q96S19 204 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 SFTPCP11686 197 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 EVI2AP22794 236 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 C5orf56Q8N8D9 126 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 RNASE8Q8TDE3 154 aaKnown RBP11.01□□□□□ -0.65
USP44-203ENST00000537435 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 CBY1Q9Y3M2 126 aa11.01□□□□□ -0.65
USP44-203ENST00000537435 ASH1LQ9NR48 2969 aaKnown RBP11.01□□□□□ -0.65
USP44-203ENST00000537435 TNFRSF6BO95407 300 aa11□□□□□ -0.65
USP44-203ENST00000537435 GATA1P15976 413 aaPredicted RBP11□□□□□ -0.65
USP44-203ENST00000537435 C8orf86Q6ZUL3 223 aa11□□□□□ -0.65
USP44-203ENST00000537435 C18orf15Q96N68 181 aa11□□□□□ -0.65
USP44-203ENST00000537435 TMEM97Q5BJF2 176 aa11□□□□□ -0.65
USP44-203ENST00000537435 TMEM78Q5T7P6 136 aa11□□□□□ -0.65
USP44-203ENST00000537435 TMEM219Q86XT9 240 aa11□□□□□ -0.65
USP44-203ENST00000537435 BOD1L2Q8IYS8 172 aa11□□□□□ -0.65
USP44-203ENST00000537435 LEPP41159 167 aa10.99□□□□□ -0.65
USP44-203ENST00000537435 NPFFR1Q9GZQ6 430 aa10.99□□□□□ -0.65
USP44-203ENST00000537435 DKK2Q9UBU2 259 aa10.99□□□□□ -0.65
USP44-203ENST00000537435 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
USP44-203ENST00000537435 K7EP13 123 aa10.99□□□□□ -0.65
USP44-203ENST00000537435 ATP5G2Q06055 141 aa10.99□□□□□ -0.65
USP44-203ENST00000537435 NXT2Q9NPJ8 142 aaKnown RBP10.99□□□□□ -0.65
USP44-203ENST00000537435 LINC00527Q9UJ94 153 aa10.99□□□□□ -0.65
USP44-203ENST00000537435 IGHV3OR16-10A0A075B7F0 116 aa10.98□□□□□ -0.65
USP44-203ENST00000537435 LY6DQ14210 128 aa10.98□□□□□ -0.65
USP44-203ENST00000537435 AMMECR1LQ6DCA0 310 aa10.98□□□□□ -0.65
USP44-203ENST00000537435 MRPL53Q96EL3 112 aaKnown RBP10.98□□□□□ -0.65
USP44-203ENST00000537435 U3KQE9 123 aa10.98□□□□□ -0.65
USP44-203ENST00000537435 SMAD7O15105 426 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms