RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 C3orf56Q8N813 242 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 PPDPFLQ8WWR9 84 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 KLF5Q13887 457 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-209ENST00000537178 C20orf144Q9BQM9 153 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 CD59P13987 128 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 DAD1P61803 113 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 GAGE1Q13065 139 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 GAGE4Q13068 117 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 GAGE5Q13069 117 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 SAA4P35542 130 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 LINC01356Q8N9X3 169 aa8.6□□□□□ -1.03
CLIP1-209ENST00000537178 MPDZO75970 2070 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 F5H768 121 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 PFN2P35080 140 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 KIAA2026Q5HYC2 2103 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 IGKV1D-17A0A075B6S4 117 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 MBD3L4A6NDZ8 208 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-209ENST00000537178 MBD3L3A6NE82 208 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-209ENST00000537178 MBD3L5A6NJ08 208 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-209ENST00000537178 PFN1P07737 140 aaKnown RBP8.59□□□□□ -1.03
CLIP1-209ENST00000537178 YPEL3P61236 119 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-209ENST00000537178 TCTEX1D4Q5JR98 221 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 FAM104BQ5XKR9 115 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 MBD3L2Q8NHZ7 208 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-209ENST00000537178 MCRIP2Q9BUT9 160 aaKnown RBP8.59□□□□□ -1.03
CLIP1-209ENST00000537178 KNCNA6PVL3 124 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 I3L3M4 83 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 GATA3P23771 443 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 Q8N8P6 123 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 TMEM75Q8N9X5 138 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 PRSS46E5RG02 174 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 DKK1O94907 266 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 XCL2Q9UBD3 114 aa8.59□□□□□ -1.03
CLIP1-209ENST00000537178 LRP4O75096 1905 aa8.58□□□□□ -1.04
CLIP1-209ENST00000537178 TCF15Q12870 199 aa8.58□□□□□ -1.04
CLIP1-209ENST00000537178 FAM110DQ8TAY7 271 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-209ENST00000537178 PNRC2Q9NPJ4 139 aaKnown RBP8.58□□□□□ -1.04
CLIP1-209ENST00000537178 ZNF407Q9C0G0 2248 aa8.58□□□□□ -1.04
CLIP1-209ENST00000537178 A0A1W2PPI3 338 aa8.58□□□□□ -1.04
CLIP1-209ENST00000537178 NPSP0C0P6 89 aa8.58□□□□□ -1.04
CLIP1-209ENST00000537178 RMI2Q96E14 147 aa8.58□□□□□ -1.04
CLIP1-209ENST00000537178 TMEM243Q9BU79 118 aa8.58□□□□□ -1.04
CLIP1-209ENST00000537178 IGHG3P01860 377 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 C18orf32Q8TCD1 76 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 LINC00479Q96M42 142 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 MESP1Q9BRJ9 268 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 BPESC1Q9GZL8 116 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 A0A0G2JNJ9 132 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 SDHAF1A6NFY7 115 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 LYL1P12980 280 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 CFPP27918 469 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 Q9UFV3 132 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 TMEM213A2RRL7 107 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 MLANAQ16655 118 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 IGKV1-16P04430 117 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 GNLYP22749 145 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 CFHR2P36980 270 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 CRLF1O75462 422 aa8.57□□□□□ -1.04
CLIP1-209ENST00000537178 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 A8MWP6 167 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 SPINK13Q1W4C9 94 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 MORN5Q5VZ52 161 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 Q6ZRM9 215 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 UBE2E1P51965 193 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 ETDBQ3ZM63 59 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 MDS2Q8NDY4 140 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 DSCR8Q96T75 97 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 SCRT2Q9NQ03 307 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 COL8A2P25067 703 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 QRFPP83859 136 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 THAP8Q8NA92 274 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 OR11H6Q8NGC7 330 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 NXPH4O95158 308 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 FGF6P10767 208 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 LYPD2Q6UXB3 125 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 HS3ST6Q96QI5 342 aa8.56□□□□□ -1.04
CLIP1-209ENST00000537178 C9orf118A6NHY6 69 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 TAL2Q16559 108 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 F8W1H4 67 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 C17orf82Q86X59 251 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-209ENST00000537178 FER1L5A0AVI2 2057 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 TRAV13-2A0A0B4J235 113 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 LINC01619G3V211 115 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 MSMBP08118 114 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 AZU1P20160 251 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 MST1LQ2TV78 715 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 Q6ZS92 163 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 PRO1854Q9UHT4 67 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 TRBV19A0A075B6N1 114 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 ATP6V0E1O15342 81 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 ZNRF2Q8NHG8 242 aa8.55□□□□□ -1.04
CLIP1-209ENST00000537178 C9JQL5 133 aa8.54□□□□□ -1.04
CLIP1-209ENST00000537178 POLR3KQ9Y2Y1 108 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-209ENST00000537178 GPR179Q6PRD1 2367 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms