RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PAX8Q06710 450 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 LGALS9BQ3B8N2 356 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 CD300EQ496F6 205 aaPredicted RBP4.45□□□□□ -1.7
VPS33A-203ENST00000536212 PRR30Q53SZ7 412 aaPredicted RBP4.45□□□□□ -1.7
VPS33A-203ENST00000536212 MPV17L2Q567V2 206 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 LGALS9CQ6DKI2 356 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 C2orf91Q6ZV80 131 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 FA2HQ7L5A8 372 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 C8orf49Q96NF6 230 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 PIMREGQ9BSJ6 248 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 AAMDCQ9H7C9 122 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 USP34Q70CQ2 3546 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 LAMA1P25391 3075 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 A0A087X0K7 114 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 TRBV7-9A0A0J9YWB2 115 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 USP17L23D6RBM5 183 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 SH2D1AO60880 128 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 NUDT3O95989 172 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 FGF6P10767 208 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 S100A7P31151 101 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 NBL1P41271 181 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 MINOS1Q5TGZ0 78 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 C11orf71Q6IPW1 123 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 LYZL1Q6UWQ5 148 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 Q6ZVH6 145 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 ZNF575Q86XF7 245 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 OR1N2Q8NGR9 330 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 PRSS3P2Q8NHM4 247 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 LINC01560Q8TB33 94 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 ARPC1AQ92747 370 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 PRR25Q96S07 402 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 C21orf62Q9NYP8 219 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 SIGLEC8Q9NYZ4 499 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 ONECUT1Q9UBC0 465 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 SMAD5-AS1Q9Y6J3 95 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 MINOS1-NBL1R4GNA1 71 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 CADP27708 2225 aa4.44□□□□□ -1.7
VPS33A-203ENST00000536212 MUC21A0A0G2JKD1 596 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 MUC21A0A140T8X8 626 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 J3QR89 54 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 SIVA1O15304 175 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 TSPAN13O95857 204 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 NCR2O95944 276 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 IGHG4P01861 327 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 CSN3P07498 182 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 FAM106CPP0CH98 169 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 EGR2P11161 476 aaPredicted RBP4.43□□□□□ -1.7
VPS33A-203ENST00000536212 GPR183P32249 361 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 IFI27P40305 119 aaPredicted RBP4.43□□□□□ -1.7
VPS33A-203ENST00000536212 RAB9AP51151 201 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 CKS1BP61024 79 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 SEC11AP67812 179 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 NDPQ00604 133 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 LOXL1Q08397 574 aaPredicted RBP4.43□□□□□ -1.7
VPS33A-203ENST00000536212 KLRD1Q13241 179 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 FAM106AQ4KMX7 169 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 MRPL51Q4U2R6 128 aaKnown RBP4.43□□□□□ -1.7
VPS33A-203ENST00000536212 PSMG4Q5JS54 123 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 KLF17Q5JT82 389 aaPredicted RBP4.43□□□□□ -1.7
VPS33A-203ENST00000536212 MUC21Q5SSG8 566 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 SERTAD4-AS1Q5TG53 156 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 FER1L6-AS1Q8NA97 138 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 PIFOQ8TCI5 191 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 MRAP2Q96G30 205 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 RNF185Q96GF1 192 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 TIMD4Q96H15 378 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 PRELID3AQ96N28 172 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 ASCL2Q99929 193 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 MCRIP2Q9BUT9 160 aaKnown RBP4.43□□□□□ -1.7
VPS33A-203ENST00000536212 SPANXCQ9NY87 97 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 THYN1Q9P016 225 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 TP73-AS1Q9UF72 201 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 HILPDAQ9Y5L2 63 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 EYSQ5T1H1 3165 aa4.43□□□□□ -1.7
VPS33A-203ENST00000536212 IGKV2-40A0A087WW87 121 aaPredicted RBP4.42□□□□□ -1.7
VPS33A-203ENST00000536212 IGHV7-81A0A0B4J1V7 117 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 GAGE12BA1L429 117 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 A1L4Q6 167 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 RBAKDNA6NC62 111 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 GAGE12HA6NDE8 117 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 D6R8Y8 96 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 SPRY2O43597 315 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 IGKV2D-40P01614 121 aaPredicted RBP4.42□□□□□ -1.7
VPS33A-203ENST00000536212 HBDP02042 147 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 ELANEP08246 267 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 CTSGP08311 255 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 EDN2P20800 178 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 ZNF80P51504 273 aaPredicted RBP4.42□□□□□ -1.7
VPS33A-203ENST00000536212 HERV-K104P63124 156 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 VMO1Q7Z5L0 202 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 BOD1L2Q8IYS8 172 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 DYNAPQ8N1N2 210 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 Q8N9W7 124 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 FAM110DQ8TAY7 271 aaPredicted RBP4.42□□□□□ -1.7
VPS33A-203ENST00000536212 WWC2-AS2Q96NR7 200 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms