RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 H3BNG1 76 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 GAGE7O76087 117 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 IL15RAQ13261 267 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 ASAH1Q13510 395 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 KIR3DS1Q14943 382 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 SSX7Q7RTT5 188 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 ENKURQ8TC29 256 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 RXFP4Q8TDU9 374 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 C7orf71A4D174 169 aa9.16□□□□□ -0.94
RTN3-207ENST00000536011 E5RGE8 158 aa9.16□□□□□ -0.94
RTN3-207ENST00000536011 TMEM78Q5T7P6 136 aa9.16□□□□□ -0.94
RTN3-207ENST00000536011 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
RTN3-207ENST00000536011 M0R3E3 92 aa9.15□□□□□ -0.94
RTN3-207ENST00000536011 NMBP08949 121 aa9.15□□□□□ -0.94
RTN3-207ENST00000536011 CYCSP99999 105 aaKnown RBP9.15□□□□□ -0.94
RTN3-207ENST00000536011 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
RTN3-207ENST00000536011 BLNKQ8WV28 456 aa9.15□□□□□ -0.94
RTN3-207ENST00000536011 LINC00467Q9BRT7 94 aa9.15□□□□□ -0.94
RTN3-207ENST00000536011 NMES1Q9C002 83 aa9.15□□□□□ -0.94
RTN3-207ENST00000536011 KLLNB2CW77 178 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 PRAF2O60831 178 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 NDUFB4O95168 129 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 GPX1P07203 203 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 PYYP10082 97 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
RTN3-207ENST00000536011 THAP6Q8TBB0 222 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 C18orf15Q96N68 181 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 MRPL32Q9BYC8 188 aaKnown RBP9.14□□□□□ -0.95
RTN3-207ENST00000536011 TMPRSS5Q9H3S3 457 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 Q9H8V8 135 aa9.14□□□□□ -0.95
RTN3-207ENST00000536011 A0A0J9YY99 117 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 CRISP2P16562 243 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
RTN3-207ENST00000536011 HOXA5P20719 270 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
RTN3-207ENST00000536011 ERCC8Q13216 396 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 ICAM4Q14773 271 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 ANXA2RQ3ZCQ2 193 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 C9orf47Q6ZRZ4 202 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 Q6ZTI0 123 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 ZNF575Q86XF7 245 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
RTN3-207ENST00000536011 RYR1P21817 5038 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 TRGV1A0A0A0MS02 117 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 A0A1W2PPQ1 181 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 A6NHS1 94 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 RGS13O14921 159 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 PET100P0DJ07 73 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 CSN1S1P47710 185 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 NHLH2Q02577 135 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 LRRC37A5PQ49AS3 106 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
RTN3-207ENST00000536011 FAM122CQ6P4D5 195 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 FAM19A4Q96LR4 140 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 AGPAT4-IT1Q9H0P7 198 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 Q9H3A6 140 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
RTN3-207ENST00000536011 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
RTN3-207ENST00000536011 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
RTN3-207ENST00000536011 UPK1BO75841 260 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 TCL1AP56279 114 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 CD300CQ08708 224 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 MIR17HGQ75NE6 70 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 PAXXQ9BUH6 204 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 WDR61Q9GZS3 305 aaKnown RBP9.11□□□□□ -0.95
RTN3-207ENST00000536011 FUT9Q9Y231 359 aa9.11□□□□□ -0.95
RTN3-207ENST00000536011 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
RTN3-207ENST00000536011 OR7C2O60412 319 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 SIX6O95475 246 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
RTN3-207ENST00000536011 ZNF138P52744 262 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 SLAQ13239 276 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 ATP5SQ99766 215 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 OR5AC2Q9NZP5 309 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
RTN3-207ENST00000536011 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
RTN3-207ENST00000536011 INMT-MINDY4F8WBC2 141 aa9.09□□□□□ -0.95
RTN3-207ENST00000536011 SPINK4O60575 86 aa9.09□□□□□ -0.95
RTN3-207ENST00000536011 TAS2R45P59539 299 aa9.09□□□□□ -0.95
RTN3-207ENST00000536011 ZNF415Q09FC8 603 aa9.09□□□□□ -0.95
RTN3-207ENST00000536011 ESRGQ1W209 222 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms