RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 PAX8Q06710 450 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 HSD52Q0P140 79 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 C8orf31Q8N9H6 132 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 A0A1W2PPM0 123 aa10.46□□□□□ -0.73
HDAC4-214ENST00000535493 TMEM11P17152 192 aa10.46□□□□□ -0.73
HDAC4-214ENST00000535493 G3V4G9 280 aa10.46□□□□□ -0.74
HDAC4-214ENST00000535493 CEACAM4O75871 244 aa10.46□□□□□ -0.74
HDAC4-214ENST00000535493 Q6ZQT7 251 aa10.46□□□□□ -0.74
HDAC4-214ENST00000535493 ASCL5Q7RTU5 278 aa10.46□□□□□ -0.74
HDAC4-214ENST00000535493 PRR25Q96S07 402 aa10.46□□□□□ -0.74
HDAC4-214ENST00000535493 JKAMPQ9P055 326 aa10.46□□□□□ -0.74
HDAC4-214ENST00000535493 PAX2Q02962 417 aa10.45□□□□□ -0.74
HDAC4-214ENST00000535493 RNF182Q8N6D2 247 aa10.45□□□□□ -0.74
HDAC4-214ENST00000535493 COL6A6A6NMZ7 2263 aa10.45□□□□□ -0.74
HDAC4-214ENST00000535493 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
HDAC4-214ENST00000535493 NCBP2LA6PVI3 153 aaKnown RBP10.45□□□□□ -0.74
HDAC4-214ENST00000535493 SHISA9B4DS77 424 aa10.45□□□□□ -0.74
HDAC4-214ENST00000535493 PRAC2D3DTV9 90 aa10.45□□□□□ -0.74
HDAC4-214ENST00000535493 PRR30Q53SZ7 412 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-214ENST00000535493 U3KQK5 164 aa10.45□□□□□ -0.74
HDAC4-214ENST00000535493 SPRY2O43597 315 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 NDPQ00604 133 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 KAAG1Q9UBP8 84 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 IGHV3-49A0A0A0MS15 119 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 Q6AWC8 147 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 LCNL1Q6ZST4 164 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 GATD1Q8NB37 220 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 FANCD2OSQ96PS1 177 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 NPFFR1Q9GZQ6 430 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
HDAC4-214ENST00000535493 NHP2Q9NX24 153 aaKnown RBP10.44□□□□□ -0.74
HDAC4-214ENST00000535493 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 A0A1B0GW15 77 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 F8W735 103 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-214ENST00000535493 PRRG2O14669 202 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 FOXC2Q99958 501 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 IGHG4P01861 327 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 ZNF562Q6V9R5 426 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 PIP4P1Q86T03 277 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 LINC01560Q8TB33 94 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 HHLA3Q9XRX5 114 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 SMAD5-AS1Q9Y6J3 95 aa10.43□□□□□ -0.74
HDAC4-214ENST00000535493 TRBV6-1A0A0K0K1D8 114 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 FABP2P12104 132 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 ZC2HC1BQ5TFG8 222 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 LYPD1Q8N2G4 141 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 CRYBG3Q68DQ2 2970 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 TRAV40A0A0B4J280 105 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 NBR2O15453 112 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 ODF1Q14990 250 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 TMEM158Q8WZ71 300 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 TNFRSF6BO95407 300 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 TRGV3P03979 118 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 SMIM13P0DJ93 91 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 IGFL3Q6UXB1 125 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 NEGR1Q7Z3B1 354 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 OR4X2Q8NGF9 303 aa10.42□□□□□ -0.74
HDAC4-214ENST00000535493 GRNP28799 593 aaKnown RBP10.41□□□□□ -0.74
HDAC4-214ENST00000535493 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 DEFB104AQ8WTQ1 72 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 GTSF1LQ9H1H1 148 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 TRBV25-1A0A075B6N4 114 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 TMEM8BA6NDV4 472 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 FCER1GP30273 86 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 IL17RELQ6ZVW7 336 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 MAPKAPK5-AS1Q8N8E1 139 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
HDAC4-214ENST00000535493 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.4□□□□□ -0.74
HDAC4-214ENST00000535493 J3KRW8 73 aa10.4□□□□□ -0.74
HDAC4-214ENST00000535493 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
HDAC4-214ENST00000535493 LY6LH3BQJ8 138 aa10.4□□□□□ -0.75
HDAC4-214ENST00000535493 MFAP4P55083 255 aa10.4□□□□□ -0.75
HDAC4-214ENST00000535493 DPF1Q92782 380 aa10.4□□□□□ -0.75
HDAC4-214ENST00000535493 KLK15Q9H2R5 256 aa10.4□□□□□ -0.75
HDAC4-214ENST00000535493 C21orf62Q9NYP8 219 aa10.4□□□□□ -0.75
HDAC4-214ENST00000535493 IGF2RP11717 2491 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 EFNA4P52798 201 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 WFDC2Q14508 124 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 DTX2Q86UW9 622 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 TNFRSF14Q92956 283 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 VSTM5A8MXK1 200 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 CFHR4Q92496 578 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 MRPL35Q9NZE8 188 aaKnown RBP10.39□□□□□ -0.75
HDAC4-214ENST00000535493 C11orf21Q9P2W6 132 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 UFC1Q9Y3C8 167 aa10.39□□□□□ -0.75
HDAC4-214ENST00000535493 CSMD2Q7Z408 3487 aa10.38□□□□□ -0.75
HDAC4-214ENST00000535493 IGLV11-55A0A075B6I3 123 aa10.38□□□□□ -0.75
HDAC4-214ENST00000535493 NDUFA3O95167 84 aa10.38□□□□□ -0.75
HDAC4-214ENST00000535493 IGKCP01834 107 aa10.38□□□□□ -0.75
HDAC4-214ENST00000535493 CTSGP08311 255 aa10.38□□□□□ -0.75
HDAC4-214ENST00000535493 H3BMG7 143 aa10.38□□□□□ -0.75
HDAC4-214ENST00000535493 SMAGPQ0VAQ4 97 aa10.38□□□□□ -0.75
HDAC4-214ENST00000535493 PDE6HQ13956 83 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms