RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 FUT9Q9Y231 359 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 MRPS16Q9Y3D3 137 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 E5RGE8 158 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 PAX4O43316 350 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 CDK2AP2O75956 126 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 NMBP08949 121 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 PET100P0DJ07 73 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 ZNF415Q09FC8 603 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 ICAM4Q14773 271 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 MORN5Q5VZ52 161 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 FAM122CQ6P4D5 195 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 LINC00612Q8N6U2 182 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 CHAC2Q8WUX2 184 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 S100ZQ8WXG8 99 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 MRPL32Q9BYC8 188 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-205ENST00000535452 M0R3E3 92 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 PLA2G10O15496 165 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 OR7C2O60412 319 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 TAS2R45P59539 299 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 ANXA2RQ3ZCQ2 193 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 FAM74A1Q5RGS3 127 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 Q6ZTI0 123 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 SPATA12Q7Z6I5 190 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 OR5C1Q8NGR4 320 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 SDHCQ99643 169 aaPredicted RBP9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 OR51M1Q9H341 326 aa9.22□□□□□ -0.93
CLSTN3-205ENST00000535452 TRGV4A0A0C4DH28 118 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 IGSF23A1L1A6 192 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 SIVA1O15304 175 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 NBEAP1P0C6P0 100 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 PYYP10082 97 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 HOXA5P20719 270 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 ERCC8Q13216 396 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 BTN1A1Q13410 526 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 ESRGQ1W209 222 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 LRRC37A5PQ49AS3 106 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 NFE4Q86UQ8 179 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 EXOC3-AS1Q8N2X6 119 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 THAP6Q8TBB0 222 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 SCGB1C1Q8TD33 95 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 C18orf15Q96N68 181 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 LINC00467Q9BRT7 94 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 PAXXQ9BUH6 204 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 HERC2O95714 4834 aa9.21□□□□□ -0.94
CLSTN3-205ENST00000535452 IGHV1OR15-1A0A075B7D0 117 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 KLLNB2CW77 178 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 IFNA5P01569 189 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 ZNF138P52744 262 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 TCL1AP56279 114 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 MRPL23Q16540 153 aaKnown RBP9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 FAM159AQ6UWV7 190 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 C9orf47Q6ZRZ4 202 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 CMTM2Q8TAZ6 248 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 AGPAT4-IT1Q9H0P7 198 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 NACAE9PAV3 2078 aa9.2□□□□□ -0.94
CLSTN3-205ENST00000535452 PRAF2O60831 178 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 CRISP2P16562 243 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 SRIP30626 198 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 ERVFC1-1P60608 527 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 KHDC3LQ587J8 217 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 LINC00299Q6ZSB3 139 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 ST6GAL2Q96JF0 529 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 ATP5SQ99766 215 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 NMES1Q9C002 83 aa9.19□□□□□ -0.94
CLSTN3-205ENST00000535452 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 IGKV2-40A0A087WW87 121 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 TRBV7-9A0A0J9YWB2 115 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 ZNF324O75467 553 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 IGKV2D-40P01614 121 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 UBE2L3P68036 154 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 CD300CQ08708 224 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 HHLA3Q9XRX5 114 aa9.18□□□□□ -0.94
CLSTN3-205ENST00000535452 KIAA1109Q2LD37 5005 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 A0A096LPF7 62 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 SSNA1O43805 119 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 SPINK4O60575 86 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 OR10J4P0C629 311 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 EVI2AP22794 236 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 DEFA1P59665 94 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 DEFA3P59666 94 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 RANP62826 216 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 NHLH2Q02577 135 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 MIR17HGQ75NE6 70 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 VGLL1Q99990 258 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 WDR61Q9GZS3 305 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
CLSTN3-205ENST00000535452 A0A1W2PPV4 95 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 RBAKDNA6NC62 111 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 K7EP13 123 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms