RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ARTNQ5T4W7 220 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 CD5P06127 495 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 CRYGCP07315 174 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 TEX36Q5VZQ5 186 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 TMEM14EPQ6UXP3 125 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 SOCS3O14543 225 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 UBE2E1P51965 193 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 DTX1Q86Y01 620 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 DSCR8Q96T75 97 aa10.15□□□□□ -0.78
SPG11-203ENST00000535302 ZNF124Q15973 351 aa10.15□□□□□ -0.79
SPG11-203ENST00000535302 FAM120AOSQ5T036 256 aa10.15□□□□□ -0.79
SPG11-203ENST00000535302 K7ERJ3 54 aa10.15□□□□□ -0.79
SPG11-203ENST00000535302 MSMBP08118 114 aa10.15□□□□□ -0.79
SPG11-203ENST00000535302 NDUFB8O95169 186 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 LY6G5BQ8NDX9 201 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
SPG11-203ENST00000535302 FAM223BA6NKX1 122 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 FAM223AQ8IWN6 122 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 C9orf139Q6ZV77 190 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 TPSG1Q9NRR2 321 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 COLCA2A8K830 154 aa10.14□□□□□ -0.79
SPG11-203ENST00000535302 IGKV1-6A0A0C4DH72 117 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 RNF114Q9Y508 228 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 PLCE1Q9P212 2302 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 LINC01619G3V211 115 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 DEFB136Q30KP8 78 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
SPG11-203ENST00000535302 K7ENP7 123 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 HLA-DRB4P13762 266 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 VWC2Q2TAL6 325 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 HLA-DRB4X5D2U9 266 aa10.13□□□□□ -0.79
SPG11-203ENST00000535302 EREGO14944 169 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 ZSWIM8A7E2V4 1837 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 FAM231BA6NCW3 169 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 IGHG4P01861 327 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 ZNF524Q96C55 264 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 FGF6P10767 208 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 Q6ZR03 302 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 Q86TA4 180 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 USMG5Q96IX5 58 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 IGLV10-54A0A075B6I4 117 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
SPG11-203ENST00000535302 CYYR1Q96J86 154 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 C1QTNF4Q9BXJ3 329 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 ARHGAP21Q5T5U3 1957 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 FHL1Q13642 323 aa10.12□□□□□ -0.79
SPG11-203ENST00000535302 SPATA25Q9BR10 227 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
SPG11-203ENST00000535302 U3KQA8 63 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 WDR86Q86TI4 376 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 TSC2P49815 1807 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 BAALCQ8WXS3 180 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 LINC01549A6NIU2 74 aa10.11□□□□□ -0.79
SPG11-203ENST00000535302 CMC4P56277 68 aaPredicted RBP10.1□□□□□ -0.79
SPG11-203ENST00000535302 SBF1O95248 1867 aa10.1□□□□□ -0.79
SPG11-203ENST00000535302 THSD7BQ9C0I4 1608 aa10.1□□□□□ -0.79
SPG11-203ENST00000535302 TSSC4Q9Y5U2 329 aaPredicted RBP10.1□□□□□ -0.79
SPG11-203ENST00000535302 ZGRF1Q86YA3 2104 aa10.1□□□□□ -0.79
SPG11-203ENST00000535302 RNF5Q99942 180 aa10.1□□□□□ -0.79
SPG11-203ENST00000535302 SHANK2-AS3Q9BTD1 123 aa10.1□□□□□ -0.79
SPG11-203ENST00000535302 SMPXQ9UHP9 88 aa10.1□□□□□ -0.79
SPG11-203ENST00000535302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
SPG11-203ENST00000535302 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
SPG11-203ENST00000535302 OOSP1A8MZH6 123 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 CACNA1BQ00975 2339 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 IGHV1-69DA0A0B4J2H0 117 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 IGHV1-69P01742 117 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 CR1LQ2VPA4 569 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 ZNF664Q8N3J9 261 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 PROK2Q9HC23 129 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 TICRRQ7Z2Z1 1910 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 TRACP01848 142 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 GRNP28799 593 aaKnown RBP10.09□□□□□ -0.79
SPG11-203ENST00000535302 NBL1P41271 181 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 KLF2Q9Y5W3 355 aaPredicted RBP10.09□□□□□ -0.79
SPG11-203ENST00000535302 DLEU1O43261 78 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 I3L3M4 83 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 HLA-DMBP28068 263 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 REG4Q9BYZ8 158 aa10.09□□□□□ -0.79
SPG11-203ENST00000535302 F6UB75 175 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 VWA8A3KMH1 1905 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 NDUFS7O75251 213 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 PCNX2A6NKB5 2137 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 IGHV3-30P01768 117 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 IGHV3-30-5P0DP03 117 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 WFDC11Q8NEX6 87 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 MST1LQ2TV78 715 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 C17orf58Q2M2W7 97 aa10.08□□□□□ -0.8
SPG11-203ENST00000535302 RBM3P98179 157 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms