RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PET100P0DJ07 73 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 M6PRP20645 277 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 NKX2-5P52952 324 aaPredicted RBP7.36□□□□□ -1.23
CAPN1-225ENST00000533704 ICAM4Q14773 271 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 SMUG1Q53HV7 270 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 C15orf53Q8NAA6 179 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 RNASE8Q8TDE3 154 aaKnown RBP7.36□□□□□ -1.23
CAPN1-225ENST00000533704 MRPL53Q96EL3 112 aaKnown RBP7.36□□□□□ -1.23
CAPN1-225ENST00000533704 ATP5SQ99766 215 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 PAXXQ9BUH6 204 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 OR51M1Q9H341 326 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 MBD2Q9UBB5 411 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 HSPB11Q9Y547 144 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 IGKV2-40A0A087WW87 121 aaPredicted RBP7.35□□□□□ -1.23
CAPN1-225ENST00000533704 C7orf71A4D174 169 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 CBY3A6NI87 242 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 OR7C2O60412 319 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 IFNA5P01569 189 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 IGKV2D-40P01614 121 aaPredicted RBP7.35□□□□□ -1.23
CAPN1-225ENST00000533704 NBEAP1P0C6P0 100 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 OR5I1Q13606 314 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 PDE6HQ13956 83 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 FFAR4Q5NUL3 377 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 SCGB1C1Q8TD33 95 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 FAM167A-AS1Q96KT0 104 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 ODF3Q96PU9 254 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 MRPL32Q9BYC8 188 aaKnown RBP7.35□□□□□ -1.23
CAPN1-225ENST00000533704 AGPAT4-IT1Q9H0P7 198 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 FUT9Q9Y231 359 aa7.35□□□□□ -1.23
CAPN1-225ENST00000533704 GAGE12BA1L429 117 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 EIF3GO75821 320 aaKnown RBP eCLIP7.34□□□□□ -1.23
CAPN1-225ENST00000533704 GAGE7O76087 117 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 SLC25A5P05141 298 aaKnown RBP7.34□□□□□ -1.23
CAPN1-225ENST00000533704 GPX1P07203 203 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 GAGE12FP0CL80 117 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 GAGE12GP0CL81 117 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 GAGE12IP0CL82 117 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 RPL12P30050 165 aaKnown RBP7.34□□□□□ -1.23
CAPN1-225ENST00000533704 RNASE4P34096 147 aaKnown RBP7.34□□□□□ -1.23
CAPN1-225ENST00000533704 UBE2L3P68036 154 aaKnown RBP7.34□□□□□ -1.23
CAPN1-225ENST00000533704 BTN1A1Q13410 526 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 RNF212Q495C1 297 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 TMEM78Q5T7P6 136 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 RNF141Q8WVD5 230 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 PHYHIPLQ96FC7 376 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 ALG5Q9Y673 324 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 MUC4Q99102 2169 aa7.34□□□□□ -1.23
CAPN1-225ENST00000533704 A0A0J9YY99 117 aa7.33□□□□□ -1.24
CAPN1-225ENST00000533704 RANP62826 216 aaKnown RBP7.33□□□□□ -1.24
CAPN1-225ENST00000533704 LGALS9BQ3B8N2 356 aa7.33□□□□□ -1.24
CAPN1-225ENST00000533704 LINC00336Q6ZUF6 198 aa7.33□□□□□ -1.24
CAPN1-225ENST00000533704 FXYD5Q96DB9 178 aa7.33□□□□□ -1.24
CAPN1-225ENST00000533704 LINC00477Q96M19 166 aa7.33□□□□□ -1.24
CAPN1-225ENST00000533704 VGLL1Q99990 258 aa7.33□□□□□ -1.24
CAPN1-225ENST00000533704 PYGO2Q9BRQ0 406 aa7.33□□□□□ -1.24
CAPN1-225ENST00000533704 LOC105371267A0A1B0GV96 52 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 RTL8CO15255 209 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 CSN1S1P47710 185 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 C9orf47Q6ZRZ4 202 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 Q6ZTI0 123 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 Q8TAT8 98 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 WFDC1Q9HC57 220 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 GSN-AS1Q9NRJ2 163 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 RPH3ALQ9UNE2 315 aa7.32□□□□□ -1.24
CAPN1-225ENST00000533704 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 KLLNB2CW77 178 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 CCL18P55774 89 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 TAS2R45P59539 299 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 KHDC3LQ587J8 217 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 PRR9Q5T870 116 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 TCTE3Q8IZS6 198 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 EIF4E3Q8N5X7 224 aaKnown RBP7.31□□□□□ -1.24
CAPN1-225ENST00000533704 ZNF680Q8NEM1 530 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 GNPNAT1Q96EK6 184 aaPredicted RBP7.31□□□□□ -1.24
CAPN1-225ENST00000533704 ST6GAL2Q96JF0 529 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 HYLS1Q96M11 299 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 Q9H3A6 140 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 TMPRSS5Q9H3S3 457 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
CAPN1-225ENST00000533704 TRGV2A0A075B6R0 118 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 A0A1W2PPV4 95 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 CRISP2P16562 243 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 HOXA5P20719 270 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 ZNF138P52744 262 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 SOHLH1Q5JUK2 328 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 Q6ZQT7 251 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 Q6ZR54 194 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 ZFAND2AQ8N6M9 145 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 LINC00612Q8N6U2 182 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 ZNF503Q96F45 646 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 FAM19A4Q96LR4 140 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 MED28Q9H204 178 aa7.3□□□□□ -1.24
CAPN1-225ENST00000533704 HMGB3O15347 200 aaKnown RBP7.29□□□□□ -1.24
CAPN1-225ENST00000533704 ZNF324O75467 553 aaPredicted RBP7.29□□□□□ -1.24
CAPN1-225ENST00000533704 FAM3BP58499 235 aaPredicted RBP7.29□□□□□ -1.24
CAPN1-225ENST00000533704 RAB2AP61019 212 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms