RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
NXF1-216ENST00000533499 TRAV12-2A0A075B6T6 113 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 F6UZH7 168 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 TSPOP30536 169 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 AMTNQ6UX39 209 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 C9orf47Q6ZRZ4 202 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 CYB561D1Q8N8Q1 229 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 RCHY1Q96PM5 261 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
NXF1-216ENST00000533499 PEX7O00628 323 aa12.77□□□□□ -0.37
NXF1-216ENST00000533499 LEPP41159 167 aa12.77□□□□□ -0.37
NXF1-216ENST00000533499 ZNF138P52744 262 aa12.77□□□□□ -0.37
NXF1-216ENST00000533499 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
NXF1-216ENST00000533499 ATG101Q9BSB4 218 aa12.77□□□□□ -0.37
NXF1-216ENST00000533499 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.37
NXF1-216ENST00000533499 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
NXF1-216ENST00000533499 TRAV34A0A0B4J273 112 aa12.76□□□□□ -0.37
NXF1-216ENST00000533499 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
NXF1-216ENST00000533499 SPRY2O43597 315 aa12.76□□□□□ -0.37
NXF1-216ENST00000533499 AKR1C3P42330 323 aa12.76□□□□□ -0.37
NXF1-216ENST00000533499 RAB14P61106 215 aa12.76□□□□□ -0.37
NXF1-216ENST00000533499 PRNTQ86SH4 94 aa12.76□□□□□ -0.37
NXF1-216ENST00000533499 SERTM2A0A1B0GWG4 89 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 A8MTW9 85 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 INSP01308 110 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 AMBPP02760 352 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
NXF1-216ENST00000533499 BCL2P10415 239 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 CDKN1BP46527 198 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 Q6ZWC4 215 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 HIST1H2BAQ96A08 127 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 LINC00479Q96M42 142 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 ZNF492Q9P255 531 aa12.75□□□□□ -0.37
NXF1-216ENST00000533499 SCO2A0A1W2PP80 73 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 GPX1P07203 203 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
NXF1-216ENST00000533499 UBE2G1P62253 170 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 FLI1Q01543 452 aaPredicted RBP12.74□□□□□ -0.37
NXF1-216ENST00000533499 KIR3DS1Q14943 382 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 NDFIP1Q9BT67 221 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 VAX2Q9UIW0 290 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 PSG8Q9UQ74 426 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 GOLT1BQ9Y3E0 138 aa12.74□□□□□ -0.37
NXF1-216ENST00000533499 NBEAL2Q6ZNJ1 2754 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 LOC102723971A0A1B0GUV8 181 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 NMBP08949 121 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
NXF1-216ENST00000533499 MEF2BQ02080 365 aaPredicted RBP12.73□□□□□ -0.37
NXF1-216ENST00000533499 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 ZNF767PQ75MW2 155 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 CCDC28AQ8IWP9 274 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 OR11H2Q8NH07 326 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 RNF183Q96D59 192 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 IGF2BP2-AS1Q96M15 143 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 ODF3Q96PU9 254 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 RARRES2Q99969 163 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 EIF5A2Q9GZV4 153 aaKnown RBP12.73□□□□□ -0.37
NXF1-216ENST00000533499 TREM1Q9NP99 234 aa12.73□□□□□ -0.37
NXF1-216ENST00000533499 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
NXF1-216ENST00000533499 RBFOX3A6NFN3 312 aa12.72□□□□□ -0.37
NXF1-216ENST00000533499 GFI1BQ5VTD9 330 aa12.72□□□□□ -0.37
NXF1-216ENST00000533499 TMEM75Q8N9X5 138 aa12.72□□□□□ -0.37
NXF1-216ENST00000533499 LINC01587Q99440 93 aa12.72□□□□□ -0.37
NXF1-216ENST00000533499 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
NXF1-216ENST00000533499 TCEAL7Q9BRU2 100 aa12.72□□□□□ -0.37
NXF1-216ENST00000533499 HTN1P15515 57 aa12.71□□□□□ -0.37
NXF1-216ENST00000533499 TAGLN2P37802 199 aaKnown RBP12.71□□□□□ -0.37
NXF1-216ENST00000533499 CEBPGP53567 150 aa12.71□□□□□ -0.37
NXF1-216ENST00000533499 IFITM2Q01629 132 aa12.71□□□□□ -0.37
NXF1-216ENST00000533499 BTN1A1Q13410 526 aa12.71□□□□□ -0.37
NXF1-216ENST00000533499 LYPD6BQ8NI32 183 aa12.71□□□□□ -0.37
NXF1-216ENST00000533499 TXNDC17Q9BRA2 123 aa12.71□□□□□ -0.37
NXF1-216ENST00000533499 MED9Q9NWA0 146 aa12.71□□□□□ -0.37
NXF1-216ENST00000533499 PRKDCP78527 4128 aaKnown RBP12.71□□□□□ -0.38
NXF1-216ENST00000533499 C7orf71A4D174 169 aa12.7□□□□□ -0.38
NXF1-216ENST00000533499 CRXO43186 299 aaPredicted RBP12.7□□□□□ -0.38
NXF1-216ENST00000533499 PMS2P11Q13670 270 aa12.7□□□□□ -0.38
NXF1-216ENST00000533499 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
NXF1-216ENST00000533499 NIPSNAP3BQ9BS92 247 aa12.7□□□□□ -0.38
NXF1-216ENST00000533499 TP53TG1Q9Y2A0 90 aa12.7□□□□□ -0.38
NXF1-216ENST00000533499 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
NXF1-216ENST00000533499 PDE6DO43924 150 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 IGLV2-11P01706 119 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 PRR9Q5T870 116 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 Q86TA4 180 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 C1orf158Q8N1D5 194 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 ZFAND2AQ8N6M9 145 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 FMC1Q96HJ9 113 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 FAM19A4Q96LR4 140 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 C8orf49Q96NF6 230 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 U3KQK5 164 aa12.69□□□□□ -0.38
NXF1-216ENST00000533499 CRISP2P16562 243 aa12.68□□□□□ -0.38
NXF1-216ENST00000533499 ZNF506Q5JVG8 444 aa12.68□□□□□ -0.38
NXF1-216ENST00000533499 TVP23CQ96ET8 276 aa12.68□□□□□ -0.38
NXF1-216ENST00000533499 FAM210AQ96ND0 272 aa12.68□□□□□ -0.38
NXF1-216ENST00000533499 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms