RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 AGPAT4-IT1Q9H0P7 198 aa10.83□□□□□ -0.68
CPSF1-211ENST00000533492 PET100P0DJ07 73 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 H2BFSP57053 126 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 TMEM78Q5T7P6 136 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 C1orf134Q5TEV5 83 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 FAM122CQ6P4D5 195 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 RNF141Q8WVD5 230 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 FAM167A-AS1Q96KT0 104 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
CPSF1-211ENST00000533492 MRPL32Q9BYC8 188 aaKnown RBP10.82□□□□□ -0.68
CPSF1-211ENST00000533492 A0A1B0GVY2 172 aa10.81□□□□□ -0.68
CPSF1-211ENST00000533492 GPX1P07203 203 aa10.81□□□□□ -0.68
CPSF1-211ENST00000533492 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
CPSF1-211ENST00000533492 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
CPSF1-211ENST00000533492 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
CPSF1-211ENST00000533492 SCGB1C1Q8TD33 95 aa10.81□□□□□ -0.68
CPSF1-211ENST00000533492 GNPNAT1Q96EK6 184 aaPredicted RBP10.81□□□□□ -0.68
CPSF1-211ENST00000533492 ATP5SQ99766 215 aa10.81□□□□□ -0.68
CPSF1-211ENST00000533492 FUT9Q9Y231 359 aa10.81□□□□□ -0.68
CPSF1-211ENST00000533492 TRAV26-1A0A087WT03 109 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 KLLNB2CW77 178 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 OR7C2O60412 319 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 MPC2O95563 127 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 IFNA5P01569 189 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 OR10J4P0C629 311 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 M6PRP20645 277 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 CD300CQ08708 224 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 DAZ2Q13117 558 aaKnown RBP10.8□□□□□ -0.68
CPSF1-211ENST00000533492 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 ZNF680Q8NEM1 530 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 HSPB11Q9Y547 144 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
CPSF1-211ENST00000533492 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-211ENST00000533492 A0A0J9YY99 117 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-211ENST00000533492 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-211ENST00000533492 RPL12P30050 165 aaKnown RBP10.79□□□□□ -0.68
CPSF1-211ENST00000533492 CSN1S1P47710 185 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 FFAR4Q5NUL3 377 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 EIF4E3Q8N5X7 224 aaKnown RBP10.79□□□□□ -0.68
CPSF1-211ENST00000533492 ZNRF2Q8NHG8 242 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 RXFP4Q8TDU9 374 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 FXYD5Q96DB9 178 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 FAM19A4Q96LR4 140 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 VGLL1Q99990 258 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 SMIM3Q9BZL3 60 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 GSN-AS1Q9NRJ2 163 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 LINC00588Q9Y4M8 146 aa10.79□□□□□ -0.68
CPSF1-211ENST00000533492 TRGV2A0A075B6R0 118 aa10.78□□□□□ -0.68
CPSF1-211ENST00000533492 RGS13O14921 159 aa10.78□□□□□ -0.68
CPSF1-211ENST00000533492 NMBP08949 121 aa10.78□□□□□ -0.68
CPSF1-211ENST00000533492 CRISP2P16562 243 aa10.78□□□□□ -0.68
CPSF1-211ENST00000533492 RANP62826 216 aaKnown RBP10.78□□□□□ -0.68
CPSF1-211ENST00000533492 Q6ZTI0 123 aa10.78□□□□□ -0.68
CPSF1-211ENST00000533492 SSX7Q7RTT5 188 aa10.78□□□□□ -0.68
CPSF1-211ENST00000533492 ZNF492Q9P255 531 aa10.78□□□□□ -0.68
CPSF1-211ENST00000533492 NBDYA0A0U1RRE5 68 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 HOXA5P20719 270 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 TAS2R45P59539 299 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 ZNF503Q96F45 646 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 PHYHIPLQ96FC7 376 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 TMPRSS5Q9H3S3 457 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 MBD2Q9UBB5 411 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 DNAH2Q9P225 4427 aa10.77□□□□□ -0.69
CPSF1-211ENST00000533492 DNAH17Q9UFH2 4485 aa10.76□□□□□ -0.69
CPSF1-211ENST00000533492 TRGV1A0A0A0MS02 117 aa10.76□□□□□ -0.69
CPSF1-211ENST00000533492 ZNF138P52744 262 aa10.76□□□□□ -0.69
CPSF1-211ENST00000533492 UBE2L3P68036 154 aaKnown RBP10.76□□□□□ -0.69
CPSF1-211ENST00000533492 KHDC3LQ587J8 217 aa10.76□□□□□ -0.69
CPSF1-211ENST00000533492 LYPD1Q8N2G4 141 aa10.76□□□□□ -0.69
CPSF1-211ENST00000533492 ZFAND2AQ8N6M9 145 aa10.76□□□□□ -0.69
CPSF1-211ENST00000533492 C11orf72Q8NBR9 251 aa10.76□□□□□ -0.69
CPSF1-211ENST00000533492 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
CPSF1-211ENST00000533492 H3BNG1 76 aa10.75□□□□□ -0.69
CPSF1-211ENST00000533492 ARPC5LQ9BPX5 153 aa10.75□□□□□ -0.69
CPSF1-211ENST00000533492 Q9H3A6 140 aa10.75□□□□□ -0.69
CPSF1-211ENST00000533492 Q9H8V8 135 aa10.75□□□□□ -0.69
CPSF1-211ENST00000533492 BATF3Q9NR55 127 aa10.75□□□□□ -0.69
CPSF1-211ENST00000533492 KLF12Q9Y4X4 402 aa10.75□□□□□ -0.69
CPSF1-211ENST00000533492 TRBV7-9A0A0J9YWB2 115 aa10.74□□□□□ -0.69
CPSF1-211ENST00000533492 TCL1AP56279 114 aa10.74□□□□□ -0.69
CPSF1-211ENST00000533492 IBA57Q5T440 356 aaKnown RBP10.74□□□□□ -0.69
CPSF1-211ENST00000533492 PRR9Q5T870 116 aa10.74□□□□□ -0.69
CPSF1-211ENST00000533492 C6orf223Q8N319 242 aa10.74□□□□□ -0.69
CPSF1-211ENST00000533492 Q8TAT8 98 aa10.74□□□□□ -0.69
CPSF1-211ENST00000533492 FAT2Q9NYQ8 4349 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 A0A1W2PPV4 95 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 RBAKDNA6NC62 111 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 SPINK4O60575 86 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 MED14OSP0DP75 135 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 ACOT6Q3I5F7 207 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-211ENST00000533492 HYLS1Q96M11 299 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 C18orf15Q96N68 181 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 TP53TG3Q9ULZ0 132 aa10.73□□□□□ -0.69
CPSF1-211ENST00000533492 ESRGQ1W209 222 aa10.72□□□□□ -0.69
CPSF1-211ENST00000533492 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
CPSF1-211ENST00000533492 Q6ZQT7 251 aa10.72□□□□□ -0.69
CPSF1-211ENST00000533492 CMTM2Q8TAZ6 248 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms